Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC9A3P48764 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC9A3P48764 AC116562.4-201ENST00000641316 2276 ntBASIC18.26■□□□□ 0.51
SLC9A3P48764 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC9A3P48764 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC9A3P48764 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC9A3P48764 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC9A3P48764 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC9A3P48764 AC007322.4-201ENST00000509611 723 ntBASIC18.26■□□□□ 0.51
SLC9A3P48764 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SLC9A3P48764 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC9A3P48764 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC9A3P48764 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC9A3P48764 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC9A3P48764 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 LETM1P2-201ENST00000597330 2178 ntBASIC18.25■□□□□ 0.51
SLC9A3P48764 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SLC9A3P48764 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC9A3P48764 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC9A3P48764 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC9A3P48764 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC9A3P48764 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC9A3P48764 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC9A3P48764 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 AL356652.1-201ENST00000615962 565 ntBASIC18.25■□□□□ 0.51
SLC9A3P48764 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SLC9A3P48764 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC9A3P48764 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC9A3P48764 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC9A3P48764 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC9A3P48764 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
SLC9A3P48764 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC9A3P48764 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.24■□□□□ 0.51
SLC9A3P48764 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.24■□□□□ 0.51
SLC9A3P48764 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC9A3P48764 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC9A3P48764 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 AC013268.1-206ENST00000638368 961 ntBASIC18.24■□□□□ 0.51
SLC9A3P48764 AC112229.1-201ENST00000639295 961 ntBASIC18.24■□□□□ 0.51
SLC9A3P48764 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC9A3P48764 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC9A3P48764 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC9A3P48764 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms