Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
SOX2P48431 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 LINC02228-203ENST00000641970 1355 ntBASIC17.55■□□□□ 0.4
SOX2P48431 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.55■□□□□ 0.4
SOX2P48431 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SOX2P48431 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SOX2P48431 AC105265.2-201ENST00000467189 838 ntBASIC17.55■□□□□ 0.4
SOX2P48431 CCDC92B-201ENST00000575506 885 ntBASIC17.55■□□□□ 0.4
SOX2P48431 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.55■□□□□ 0.4
SOX2P48431 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX2P48431 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SOX2P48431 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 BX323043.1-201ENST00000641006 1765 ntBASIC17.54■□□□□ 0.4
SOX2P48431 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 AC027612.3-201ENST00000413684 1047 ntBASIC17.54■□□□□ 0.4
SOX2P48431 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.54■□□□□ 0.4
SOX2P48431 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.54■□□□□ 0.4
SOX2P48431 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX2P48431 FAM21FP-204ENST00000608637 956 ntBASIC17.54■□□□□ 0.4
SOX2P48431 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX2P48431 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 RBM17P2-201ENST00000616397 1405 ntBASIC17.54■□□□□ 0.4
SOX2P48431 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX2P48431 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.54■□□□□ 0.4
SOX2P48431 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX2P48431 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX2P48431 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX2P48431 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX2P48431 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.53■□□□□ 0.4
SOX2P48431 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX2P48431 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.53■□□□□ 0.4
SOX2P48431 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.53■□□□□ 0.4
SOX2P48431 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX2P48431 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SOX2P48431 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SOX2P48431 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX2P48431 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.53■□□□□ 0.4
SOX2P48431 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX2P48431 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SOX2P48431 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SOX2P48431 AC005332.7-201ENST00000614046 2005 ntBASIC17.52■□□□□ 0.4
SOX2P48431 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.52■□□□□ 0.4
SOX2P48431 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.52■□□□□ 0.4
SOX2P48431 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.52■□□□□ 0.4
SOX2P48431 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.52■□□□□ 0.4
SOX2P48431 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.52■□□□□ 0.4
SOX2P48431 AL139246.5-201ENST00000606645 996 ntBASIC17.52■□□□□ 0.4
SOX2P48431 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SOX2P48431 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SOX2P48431 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SOX2P48431 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SOX2P48431 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SOX2P48431 AC093484.2-201ENST00000580996 2166 ntBASIC17.52■□□□□ 0.39
SOX2P48431 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX2P48431 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.52■□□□□ 0.39
SOX2P48431 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms