Protein–RNA interactions for Protein: P47047

MTR4, ATP-dependent RNA helicase DOB1, yeastyeast

Known RBP Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MTR4P47047 YGL041C-BYGL041C-B 183 nt1.91□□□□□ -2.1
MTR4P47047 YLR422WYLR422W 5799 nt1.91□□□□□ -2.1
MTR4P47047 MON2YNL297C 4911 nt1.91□□□□□ -2.1
MTR4P47047 YLR041WYLR041W 321 nt1.9□□□□□ -2.11
MTR4P47047 YML002WYML002W 2214 nt1.89□□□□□ -2.11
MTR4P47047 TRM732YMR259C 4263 nt1.89□□□□□ -2.11
MTR4P47047 FIG2YCR089W 4830 nt1.88□□□□□ -2.11
MTR4P47047 NOP9YJL010C 2001 nt1.88□□□□□ -2.11
MTR4P47047 SSK2YNR031C 4740 nt1.87□□□□□ -2.11
MTR4P47047 SET3YKR029C 2256 nt1.87□□□□□ -2.11
MTR4P47047 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
MTR4P47047 ASE1YOR058C 2658 nt1.86□□□□□ -2.11
MTR4P47047 STO1YMR125W 2586 nt1.85□□□□□ -2.11
MTR4P47047 IML1YJR138W 4755 nt1.84□□□□□ -2.11
MTR4P47047 SEC21YNL287W 2808 nt1.83□□□□□ -2.12
MTR4P47047 FYV10YIL097W 1551 nt1.83□□□□□ -2.12
MTR4P47047 tM(CAU)Q2tM(CAU)Q2 78 nt1.82□□□□□ -2.12
MTR4P47047 PIK1YNL267W 3201 nt1.81□□□□□ -2.12
MTR4P47047 SMC1YFL008W 3678 nt1.81□□□□□ -2.12
MTR4P47047 YLR232WYLR232W 348 nt1.8□□□□□ -2.12
MTR4P47047 snR190snR190 190 nt1.8□□□□□ -2.12
MTR4P47047 RAD9YDR217C 3930 nt1.79□□□□□ -2.12
MTR4P47047 YDR210WYDR210W 228 nt1.79□□□□□ -2.12
MTR4P47047 SEC3YER008C 4011 nt1.79□□□□□ -2.12
MTR4P47047 KAP120YPL125W 3099 nt1.78□□□□□ -2.12
MTR4P47047 PMD1YER132C 5262 nt1.78□□□□□ -2.12
MTR4P47047 APL3YBL037W 3078 nt1.78□□□□□ -2.12
MTR4P47047 WAR1YML076C 2835 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)E1tH(GUG)E1 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)E2tH(GUG)E2 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)G1tH(GUG)G1 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)G2tH(GUG)G2 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)HtH(GUG)H 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)KtH(GUG)K 72 nt1.77□□□□□ -2.13
MTR4P47047 tH(GUG)MtH(GUG)M 72 nt1.77□□□□□ -2.13
MTR4P47047 SWI4YER111C 3282 nt1.76□□□□□ -2.13
MTR4P47047 RPL26BYGR034W 384 nt1.76□□□□□ -2.13
MTR4P47047 tS(GCU)Q1tS(GCU)Q1 86 nt1.76□□□□□ -2.13
MTR4P47047 BST1YFL025C 3090 nt1.75□□□□□ -2.13
MTR4P47047 SXM1YDR395W 2835 nt1.75□□□□□ -2.13
MTR4P47047 ROM2YLR371W 4071 nt1.75□□□□□ -2.13
MTR4P47047 YDL073WYDL073W 2955 nt1.73□□□□□ -2.13
MTR4P47047 RPM2YML091C 3609 nt1.73□□□□□ -2.13
MTR4P47047 YIL142C-AYIL142C-A 333 nt1.73□□□□□ -2.13
MTR4P47047 BIR1YJR089W 2865 nt1.72□□□□□ -2.13
MTR4P47047 YJL127W-AYJL127W-A 117 nt1.72□□□□□ -2.13
MTR4P47047 SPC110YDR356W 2835 nt1.72□□□□□ -2.13
MTR4P47047 GEA2YEL022W 4380 nt1.72□□□□□ -2.13
MTR4P47047 snR81snR81 201 nt1.71□□□□□ -2.14
MTR4P47047 NUP188YML103C 4968 nt1.7□□□□□ -2.14
MTR4P47047 YGR146C-AYGR146C-A 162 nt1.7□□□□□ -2.14
MTR4P47047 YBR200W-AYBR200W-A 165 nt1.69□□□□□ -2.14
MTR4P47047 SEC1YDR164C 2175 nt1.69□□□□□ -2.14
MTR4P47047 CDC25YLR310C 4770 nt1.68□□□□□ -2.14
MTR4P47047 CDC39YCR093W 6327 nt1.68□□□□□ -2.14
MTR4P47047 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
MTR4P47047 AZF1YOR113W 2745 nt1.67□□□□□ -2.14
MTR4P47047 YNL266WYNL266W 420 nt1.66□□□□□ -2.14
MTR4P47047 YBR072C-AYBR072C-A 162 nt1.66□□□□□ -2.14
MTR4P47047 FYV8YGR196C 2454 nt1.66□□□□□ -2.14
MTR4P47047 EST2YLR318W 2655 nt1.64□□□□□ -2.15
MTR4P47047 PRP16YKR086W 3216 nt1.63□□□□□ -2.15
MTR4P47047 tV(UAC)BtV(UAC)B 74 nt1.63□□□□□ -2.15
MTR4P47047 tV(UAC)DtV(UAC)D 74 nt1.63□□□□□ -2.15
MTR4P47047 YAL037C-AYAL037C-A 93 nt1.63□□□□□ -2.15
MTR4P47047 YLL066W-BYLL066W-B 171 nt1.63□□□□□ -2.15
MTR4P47047 MSN5YDR335W 3675 nt1.63□□□□□ -2.15
MTR4P47047 PET127YOR017W 2403 nt1.62□□□□□ -2.15
MTR4P47047 tQ(UUG)E2tQ(UUG)E2 72 nt1.62□□□□□ -2.15
MTR4P47047 CLU1YMR012W 3834 nt1.62□□□□□ -2.15
MTR4P47047 SEC8YPR055W 3198 nt1.62□□□□□ -2.15
MTR4P47047 snR45snR45 172 nt1.61□□□□□ -2.15
MTR4P47047 SIP4YJL089W 2490 nt1.6□□□□□ -2.15
MTR4P47047 tN(GUU)QtN(GUU)Q 71 nt1.59□□□□□ -2.15
MTR4P47047 YLR399W-AYLR399W-A 105 nt1.57□□□□□ -2.16
MTR4P47047 YPR160W-AYPR160W-A 81 nt1.57□□□□□ -2.16
MTR4P47047 HKR1YDR420W 5409 nt1.56□□□□□ -2.16
MTR4P47047 NNF2YGR089W 2811 nt1.54□□□□□ -2.16
MTR4P47047 YPR117WYPR117W 7470 nt1.54□□□□□ -2.16
MTR4P47047 YOL083C-AYOL083C-A 141 nt1.51□□□□□ -2.17
MTR4P47047 snR62snR62 100 nt1.5□□□□□ -2.17
MTR4P47047 YBL071C-BYBL071C-B 99 nt1.5□□□□□ -2.17
MTR4P47047 YSP1YHR155W 3687 nt1.49□□□□□ -2.17
MTR4P47047 MYO1YHR023W 5787 nt1.49□□□□□ -2.17
MTR4P47047 BEM3YPL115C 3387 nt1.48□□□□□ -2.17
MTR4P47047 YNL284C-BYNL284C-B 5268 nt1.48□□□□□ -2.17
MTR4P47047 YPL060C-AYPL060C-A 3315 nt1.48□□□□□ -2.17
MTR4P47047 UBP3YER151C 2739 nt1.47□□□□□ -2.17
MTR4P47047 YBR196C-AYBR196C-A 150 nt1.46□□□□□ -2.18
MTR4P47047 ULP2YIL031W 3105 nt1.46□□□□□ -2.18
MTR4P47047 NST1YNL091W 3723 nt1.45□□□□□ -2.18
MTR4P47047 SEC10YLR166C 2616 nt1.44□□□□□ -2.18
MTR4P47047 GLG1YKR058W 1851 nt1.44□□□□□ -2.18
MTR4P47047 RPS26AYGL189C 360 nt1.44□□□□□ -2.18
MTR4P47047 SPT7YBR081C 3999 nt1.43□□□□□ -2.18
MTR4P47047 PAU12YGR294W 363 nt1.41□□□□□ -2.18
MTR4P47047 PAU24YBR301W 363 nt1.41□□□□□ -2.18
MTR4P47047 YOL164W-AYOL164W-A 183 nt1.37□□□□□ -2.19
MTR4P47047 YLR286W-AYLR286W-A 135 nt1.34□□□□□ -2.19
MTR4P47047 YDR034C-AYDR034C-A 177 nt1.32□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms