Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC3P40938 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RFC3P40938 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC3P40938 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC3P40938 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.29■□□□□ 0.52
RFC3P40938 Z99916.2-201ENST00000604037 246 ntBASIC18.29■□□□□ 0.52
RFC3P40938 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC3P40938 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC3P40938 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RFC3P40938 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RFC3P40938 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC3P40938 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC3P40938 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.28■□□□□ 0.52
RFC3P40938 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC3P40938 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RFC3P40938 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RFC3P40938 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFC3P40938 AC124016.1-201ENST00000609552 612 ntBASIC18.28■□□□□ 0.52
RFC3P40938 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC3P40938 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC3P40938 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFC3P40938 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC3P40938 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC3P40938 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC3P40938 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFC3P40938 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC3P40938 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC3P40938 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC3P40938 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.27■□□□□ 0.52
RFC3P40938 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFC3P40938 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC3P40938 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC3P40938 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 AC006128.1-201ENST00000624704 1661 ntBASIC18.26■□□□□ 0.51
RFC3P40938 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC3P40938 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.26■□□□□ 0.51
RFC3P40938 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.26■□□□□ 0.51
RFC3P40938 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.26■□□□□ 0.51
RFC3P40938 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFC3P40938 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC3P40938 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC3P40938 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFC3P40938 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 MIR718-201ENST00000390190 70 ntBASIC18.25■□□□□ 0.51
RFC3P40938 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC3P40938 SNORA78-201ENST00000459373 127 ntBASIC18.25■□□□□ 0.51
RFC3P40938 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC3P40938 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC3P40938 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC3P40938 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
RFC3P40938 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RFC3P40938 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC3P40938 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC3P40938 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms