Protein–RNA interactions for Protein: P40558

CFD1, Cytosolic Fe-S cluster assembly factor CFD1, yeastyeast

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CFD1P40558 YLL020CYLL020C 306 nt1.27□□□□□ -2.21
CFD1P40558 APL3YBL037W 3078 nt1.27□□□□□ -2.21
CFD1P40558 EAF1YDR359C 2949 nt1.27□□□□□ -2.21
CFD1P40558 SXM1YDR395W 2835 nt1.27□□□□□ -2.21
CFD1P40558 SEC21YNL287W 2808 nt1.26□□□□□ -2.21
CFD1P40558 CDC25YLR310C 4770 nt1.26□□□□□ -2.21
CFD1P40558 CDC39YCR093W 6327 nt1.25□□□□□ -2.21
CFD1P40558 BST1YFL025C 3090 nt1.25□□□□□ -2.21
CFD1P40558 YCR095W-AYCR095W-A 159 nt1.25□□□□□ -2.21
CFD1P40558 YML002WYML002W 2214 nt1.25□□□□□ -2.21
CFD1P40558 MYO1YHR023W 5787 nt1.24□□□□□ -2.21
CFD1P40558 YKL100W-AYKL100W-A 90 nt1.24□□□□□ -2.21
CFD1P40558 YBR099CYBR099C 384 nt1.24□□□□□ -2.21
CFD1P40558 snR39BsnR39B 96 nt1.24□□□□□ -2.21
CFD1P40558 FYV10YIL097W 1551 nt1.24□□□□□ -2.21
CFD1P40558 ASE1YOR058C 2658 nt1.23□□□□□ -2.21
CFD1P40558 SWI4YER111C 3282 nt1.23□□□□□ -2.21
CFD1P40558 QCR9YGR183C 201 nt1.23□□□□□ -2.21
CFD1P40558 snR190snR190 190 nt1.23□□□□□ -2.21
CFD1P40558 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
CFD1P40558 OST4YDL232W 111 nt1.22□□□□□ -2.21
CFD1P40558 YDR544CYDR544C 429 nt1.22□□□□□ -2.21
CFD1P40558 YNL067W-BYNL067W-B 141 nt1.22□□□□□ -2.21
CFD1P40558 PMP2YEL017C-A 132 nt1.21□□□□□ -2.22
CFD1P40558 YBL109WYBL109W 336 nt1.21□□□□□ -2.22
CFD1P40558 YBR200W-AYBR200W-A 165 nt1.21□□□□□ -2.22
CFD1P40558 LAA1YJL207C 6045 nt1.2□□□□□ -2.22
CFD1P40558 RPL26BYGR034W 384 nt1.2□□□□□ -2.22
CFD1P40558 YHR131W-AYHR131W-A 246 nt1.2□□□□□ -2.22
CFD1P40558 SOM1YEL059C-A 225 nt1.19□□□□□ -2.22
CFD1P40558 YLR041WYLR041W 321 nt1.19□□□□□ -2.22
CFD1P40558 YNL103W-AYNL103W-A 90 nt1.19□□□□□ -2.22
CFD1P40558 BUD3YCL014W 4911 nt1.18□□□□□ -2.22
CFD1P40558 IML1YJR138W 4755 nt1.18□□□□□ -2.22
CFD1P40558 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
CFD1P40558 EST2YLR318W 2655 nt1.18□□□□□ -2.22
CFD1P40558 YDR524C-AYDR524C-A 120 nt1.16□□□□□ -2.22
CFD1P40558 YLR232WYLR232W 348 nt1.16□□□□□ -2.22
CFD1P40558 NUP145YGL092W 3954 nt1.15□□□□□ -2.23
CFD1P40558 RAD9YDR217C 3930 nt1.15□□□□□ -2.23
CFD1P40558 ROM2YLR371W 4071 nt1.15□□□□□ -2.23
CFD1P40558 TFB5YDR079C-A 219 nt1.14□□□□□ -2.23
CFD1P40558 tM(CAU)Q2tM(CAU)Q2 78 nt1.14□□□□□ -2.23
CFD1P40558 tV(UAC)BtV(UAC)B 74 nt1.14□□□□□ -2.23
CFD1P40558 tV(UAC)DtV(UAC)D 74 nt1.14□□□□□ -2.23
CFD1P40558 MSN5YDR335W 3675 nt1.13□□□□□ -2.23
CFD1P40558 YCS4YLR272C 3531 nt1.12□□□□□ -2.23
CFD1P40558 tN(GUU)QtN(GUU)Q 71 nt1.12□□□□□ -2.23
CFD1P40558 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
CFD1P40558 YDR210WYDR210W 228 nt1.11□□□□□ -2.23
CFD1P40558 YBR178WYBR178W 375 nt1.11□□□□□ -2.23
CFD1P40558 SEC3YER008C 4011 nt1.11□□□□□ -2.23
CFD1P40558 NST1YNL091W 3723 nt1.11□□□□□ -2.23
CFD1P40558 PRP16YKR086W 3216 nt1.1□□□□□ -2.23
CFD1P40558 PAU12YGR294W 363 nt1.07□□□□□ -2.24
CFD1P40558 YJL127W-AYJL127W-A 117 nt1.07□□□□□ -2.24
CFD1P40558 PAU24YBR301W 363 nt1.07□□□□□ -2.24
CFD1P40558 COG6YNL041C 2520 nt1.07□□□□□ -2.24
CFD1P40558 RCO1YMR075W 2055 nt1.06□□□□□ -2.24
CFD1P40558 SEC1YDR164C 2175 nt1.06□□□□□ -2.24
CFD1P40558 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
CFD1P40558 SEC8YPR055W 3198 nt1.06□□□□□ -2.24
CFD1P40558 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
CFD1P40558 SPT7YBR081C 3999 nt1.06□□□□□ -2.24
CFD1P40558 snR61snR61 90 nt1.05□□□□□ -2.24
CFD1P40558 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
CFD1P40558 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
CFD1P40558 YDL073WYDL073W 2955 nt1.04□□□□□ -2.24
CFD1P40558 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
CFD1P40558 BEM3YPL115C 3387 nt1.03□□□□□ -2.24
CFD1P40558 YMR326CYMR326C 309 nt1.03□□□□□ -2.24
CFD1P40558 YLR399W-AYLR399W-A 105 nt1.02□□□□□ -2.25
CFD1P40558 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
CFD1P40558 YGL041C-BYGL041C-B 183 nt1□□□□□ -2.25
CFD1P40558 UBP3YER151C 2739 nt0.99□□□□□ -2.25
CFD1P40558 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
CFD1P40558 YGR146C-AYGR146C-A 162 nt0.98□□□□□ -2.25
CFD1P40558 YHR217CYHR217C 462 nt0.98□□□□□ -2.25
CFD1P40558 BIR1YJR089W 2865 nt0.97□□□□□ -2.25
CFD1P40558 YNL266WYNL266W 420 nt0.96□□□□□ -2.26
CFD1P40558 YBR072C-AYBR072C-A 162 nt0.96□□□□□ -2.26
CFD1P40558 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
CFD1P40558 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
CFD1P40558 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
CFD1P40558 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
CFD1P40558 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
CFD1P40558 DOP1YDR141C 5097 nt0.94□□□□□ -2.26
CFD1P40558 SCC2YDR180W 4482 nt0.94□□□□□ -2.26
CFD1P40558 NNF2YGR089W 2811 nt0.93□□□□□ -2.26
CFD1P40558 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
CFD1P40558 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
CFD1P40558 YSP1YHR155W 3687 nt0.92□□□□□ -2.26
CFD1P40558 BEM2YER155C 6504 nt0.9□□□□□ -2.27
CFD1P40558 GLG1YKR058W 1851 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 36.5 ms