Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 YLR232WYLR232W 348 nt1.52□□□□□ -2.17
SDP1P40479 YBR200W-AYBR200W-A 165 nt1.52□□□□□ -2.17
SDP1P40479 NUP188YML103C 4968 nt1.52□□□□□ -2.17
SDP1P40479 FIG2YCR089W 4830 nt1.5□□□□□ -2.17
SDP1P40479 CFT1YDR301W 4074 nt1.5□□□□□ -2.17
SDP1P40479 ASE1YOR058C 2658 nt1.5□□□□□ -2.17
SDP1P40479 YHR217CYHR217C 462 nt1.5□□□□□ -2.17
SDP1P40479 YMR247W-AYMR247W-A 144 nt1.5□□□□□ -2.17
SDP1P40479 NUP145YGL092W 3954 nt1.49□□□□□ -2.17
SDP1P40479 AZF1YOR113W 2745 nt1.48□□□□□ -2.17
SDP1P40479 STF2YGR008C 255 nt1.48□□□□□ -2.17
SDP1P40479 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
SDP1P40479 BRR2YER172C 6492 nt1.47□□□□□ -2.17
SDP1P40479 CHS1YNL192W 3396 nt1.46□□□□□ -2.18
SDP1P40479 SEC3YER008C 4011 nt1.46□□□□□ -2.18
SDP1P40479 EST2YLR318W 2655 nt1.45□□□□□ -2.18
SDP1P40479 REV3YPL167C 4515 nt1.44□□□□□ -2.18
SDP1P40479 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
SDP1P40479 SXM1YDR395W 2835 nt1.42□□□□□ -2.18
SDP1P40479 YDR210WYDR210W 228 nt1.42□□□□□ -2.18
SDP1P40479 YJL127W-AYJL127W-A 117 nt1.42□□□□□ -2.18
SDP1P40479 CLU1YMR012W 3834 nt1.42□□□□□ -2.18
SDP1P40479 CDC39YCR093W 6327 nt1.41□□□□□ -2.18
SDP1P40479 YGL041C-BYGL041C-B 183 nt1.41□□□□□ -2.18
SDP1P40479 SBH1YER087C-B 249 nt1.4□□□□□ -2.19
SDP1P40479 CCH1YGR217W 6120 nt1.4□□□□□ -2.19
SDP1P40479 COG6YNL041C 2520 nt1.39□□□□□ -2.19
SDP1P40479 SEC8YPR055W 3198 nt1.39□□□□□ -2.19
SDP1P40479 ROM2YLR371W 4071 nt1.39□□□□□ -2.19
SDP1P40479 KAP120YPL125W 3099 nt1.39□□□□□ -2.19
SDP1P40479 SSK2YNR031C 4740 nt1.39□□□□□ -2.19
SDP1P40479 PRP16YKR086W 3216 nt1.38□□□□□ -2.19
SDP1P40479 CDC25YLR310C 4770 nt1.38□□□□□ -2.19
SDP1P40479 RCO1YMR075W 2055 nt1.38□□□□□ -2.19
SDP1P40479 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SDP1P40479 YDL247W-AYDL247W-A 75 nt1.37□□□□□ -2.19
SDP1P40479 YGR146C-AYGR146C-A 162 nt1.35□□□□□ -2.19
SDP1P40479 BEM3YPL115C 3387 nt1.34□□□□□ -2.19
SDP1P40479 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
SDP1P40479 YLR399W-AYLR399W-A 105 nt1.34□□□□□ -2.19
SDP1P40479 SEC1YDR164C 2175 nt1.34□□□□□ -2.2
SDP1P40479 MSN5YDR335W 3675 nt1.34□□□□□ -2.2
SDP1P40479 YPR160W-AYPR160W-A 81 nt1.33□□□□□ -2.2
SDP1P40479 MEC1YBR136W 7107 nt1.32□□□□□ -2.2
SDP1P40479 BIR1YJR089W 2865 nt1.32□□□□□ -2.2
SDP1P40479 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
SDP1P40479 tQ(UUG)E2tQ(UUG)E2 72 nt1.31□□□□□ -2.2
SDP1P40479 YNL266WYNL266W 420 nt1.29□□□□□ -2.2
SDP1P40479 PET127YOR017W 2403 nt1.29□□□□□ -2.2
SDP1P40479 IRA1YBR140C 9279 nt1.27□□□□□ -2.21
SDP1P40479 YSP1YHR155W 3687 nt1.26□□□□□ -2.21
SDP1P40479 UBP3YER151C 2739 nt1.25□□□□□ -2.21
SDP1P40479 CAT8YMR280C 4302 nt1.25□□□□□ -2.21
SDP1P40479 YBR072C-AYBR072C-A 162 nt1.25□□□□□ -2.21
SDP1P40479 RPM2YML091C 3609 nt1.24□□□□□ -2.21
SDP1P40479 snR81snR81 201 nt1.22□□□□□ -2.21
SDP1P40479 FYV8YGR196C 2454 nt1.22□□□□□ -2.21
SDP1P40479 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
SDP1P40479 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
SDP1P40479 PIK1YNL267W 3201 nt1.19□□□□□ -2.22
SDP1P40479 NNF2YGR089W 2811 nt1.19□□□□□ -2.22
SDP1P40479 tS(GCU)Q1tS(GCU)Q1 86 nt1.18□□□□□ -2.22
SDP1P40479 YAL037C-AYAL037C-A 93 nt1.18□□□□□ -2.22
SDP1P40479 NUP192YJL039C 5052 nt1.18□□□□□ -2.22
SDP1P40479 LAA1YJL207C 6045 nt1.17□□□□□ -2.22
SDP1P40479 ULP2YIL031W 3105 nt1.17□□□□□ -2.22
SDP1P40479 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
SDP1P40479 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
SDP1P40479 YBR196C-AYBR196C-A 150 nt1.15□□□□□ -2.23
SDP1P40479 YGR130CYGR130C 2451 nt1.15□□□□□ -2.23
SDP1P40479 YIL142C-AYIL142C-A 333 nt1.14□□□□□ -2.23
SDP1P40479 MSH3YCR092C 3057 nt1.13□□□□□ -2.23
SDP1P40479 YOL083C-AYOL083C-A 141 nt1.13□□□□□ -2.23
SDP1P40479 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
SDP1P40479 SEC10YLR166C 2616 nt1.12□□□□□ -2.23
SDP1P40479 NST1YNL091W 3723 nt1.12□□□□□ -2.23
SDP1P40479 YLL006W-AYLL006W-A 177 nt1.11□□□□□ -2.23
SDP1P40479 RKR1YMR247C 4689 nt1.09□□□□□ -2.23
SDP1P40479 ANS1YHR126C 480 nt1.06□□□□□ -2.24
SDP1P40479 YLL066W-BYLL066W-B 171 nt1.06□□□□□ -2.24
SDP1P40479 YBL071C-BYBL071C-B 99 nt1.06□□□□□ -2.24
SDP1P40479 CSE1YGL238W 2883 nt1.06□□□□□ -2.24
SDP1P40479 BUD3YCL014W 4911 nt1.05□□□□□ -2.24
SDP1P40479 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
SDP1P40479 snR45snR45 172 nt1.03□□□□□ -2.24
SDP1P40479 EST1YLR233C 2100 nt1.03□□□□□ -2.25
SDP1P40479 tD(GUC)QtD(GUC)Q 75 nt1.02□□□□□ -2.25
SDP1P40479 RPS26AYGL189C 360 nt1.02□□□□□ -2.25
SDP1P40479 YLR286W-AYLR286W-A 135 nt1.02□□□□□ -2.25
SDP1P40479 snR62snR62 100 nt1□□□□□ -2.25
SDP1P40479 snR69snR69 101 nt1□□□□□ -2.25
SDP1P40479 NIP1YMR309C 2439 nt1□□□□□ -2.25
SDP1P40479 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
SDP1P40479 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
SDP1P40479 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 54 ms