Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 CHS1YNL192W 3396 nt1.61□□□□□ -2.15
RSP5P39940 REV3YPL167C 4515 nt1.6□□□□□ -2.15
RSP5P39940 PRP5YBR237W 2550 nt1.59□□□□□ -2.15
RSP5P39940 RCO1YMR075W 2055 nt1.59□□□□□ -2.15
RSP5P39940 YGL123C-AYGL123C-A 231 nt1.59□□□□□ -2.15
RSP5P39940 RPL26BYGR034W 384 nt1.59□□□□□ -2.15
RSP5P39940 STF2YGR008C 255 nt1.58□□□□□ -2.16
RSP5P39940 COX5BYIL111W 456 nt1.58□□□□□ -2.16
RSP5P39940 STB6YKL072W 2301 nt1.58□□□□□ -2.16
RSP5P39940 CHS6YJL099W 2241 nt1.58□□□□□ -2.16
RSP5P39940 NUP157YER105C 4176 nt1.58□□□□□ -2.16
RSP5P39940 YLL066W-BYLL066W-B 171 nt1.56□□□□□ -2.16
RSP5P39940 snR45snR45 172 nt1.56□□□□□ -2.16
RSP5P39940 YGL182CYGL182C 324 nt1.55□□□□□ -2.16
RSP5P39940 YHR131W-AYHR131W-A 246 nt1.53□□□□□ -2.16
RSP5P39940 snR39BsnR39B 96 nt1.53□□□□□ -2.16
RSP5P39940 GEA2YEL022W 4380 nt1.53□□□□□ -2.16
RSP5P39940 YML002WYML002W 2214 nt1.51□□□□□ -2.17
RSP5P39940 UTP8YGR128C 2142 nt1.51□□□□□ -2.17
RSP5P39940 QCR9YGR183C 201 nt1.51□□□□□ -2.17
RSP5P39940 COG6YNL041C 2520 nt1.5□□□□□ -2.17
RSP5P39940 SPC110YDR356W 2835 nt1.5□□□□□ -2.17
RSP5P39940 YBL039C-AYBL039C-A 84 nt1.5□□□□□ -2.17
RSP5P39940 YOR161W-AYOR161W-A 81 nt1.5□□□□□ -2.17
RSP5P39940 BFR2YDR299W 1605 nt1.49□□□□□ -2.17
RSP5P39940 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
RSP5P39940 snR81snR81 201 nt1.48□□□□□ -2.17
RSP5P39940 snR190snR190 190 nt1.48□□□□□ -2.17
RSP5P39940 CAT8YMR280C 4302 nt1.48□□□□□ -2.17
RSP5P39940 SEC21YNL287W 2808 nt1.47□□□□□ -2.17
RSP5P39940 KAP120YPL125W 3099 nt1.46□□□□□ -2.18
RSP5P39940 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
RSP5P39940 ASE1YOR058C 2658 nt1.45□□□□□ -2.18
RSP5P39940 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
RSP5P39940 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
RSP5P39940 SSK2YNR031C 4740 nt1.42□□□□□ -2.18
RSP5P39940 TAH1YCR060W 336 nt1.42□□□□□ -2.18
RSP5P39940 YLR041WYLR041W 321 nt1.42□□□□□ -2.18
RSP5P39940 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
RSP5P39940 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
RSP5P39940 YLR399W-AYLR399W-A 105 nt1.4□□□□□ -2.19
RSP5P39940 PET127YOR017W 2403 nt1.39□□□□□ -2.19
RSP5P39940 FYV10YIL097W 1551 nt1.39□□□□□ -2.19
RSP5P39940 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
RSP5P39940 snR62snR62 100 nt1.39□□□□□ -2.19
RSP5P39940 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
RSP5P39940 YDR210WYDR210W 228 nt1.38□□□□□ -2.19
RSP5P39940 YAL037C-AYAL037C-A 93 nt1.38□□□□□ -2.19
RSP5P39940 BIR1YJR089W 2865 nt1.35□□□□□ -2.19
RSP5P39940 tM(CAU)Q2tM(CAU)Q2 78 nt1.35□□□□□ -2.19
RSP5P39940 YBR072C-AYBR072C-A 162 nt1.35□□□□□ -2.19
RSP5P39940 PIK1YNL267W 3201 nt1.35□□□□□ -2.19
RSP5P39940 YPR160W-AYPR160W-A 81 nt1.34□□□□□ -2.19
RSP5P39940 NUP192YJL039C 5052 nt1.33□□□□□ -2.2
RSP5P39940 YNL266WYNL266W 420 nt1.33□□□□□ -2.2
RSP5P39940 RAD9YDR217C 3930 nt1.33□□□□□ -2.2
RSP5P39940 MSH3YCR092C 3057 nt1.33□□□□□ -2.2
RSP5P39940 YLR232WYLR232W 348 nt1.32□□□□□ -2.2
RSP5P39940 SEC1YDR164C 2175 nt1.32□□□□□ -2.2
RSP5P39940 YBL071C-BYBL071C-B 99 nt1.31□□□□□ -2.2
RSP5P39940 RPM2YML091C 3609 nt1.31□□□□□ -2.2
RSP5P39940 YJL127W-AYJL127W-A 117 nt1.3□□□□□ -2.2
RSP5P39940 YOL083C-AYOL083C-A 141 nt1.3□□□□□ -2.2
RSP5P39940 YDL073WYDL073W 2955 nt1.3□□□□□ -2.2
RSP5P39940 YGR146C-AYGR146C-A 162 nt1.27□□□□□ -2.21
RSP5P39940 YSP1YHR155W 3687 nt1.26□□□□□ -2.21
RSP5P39940 UBP3YER151C 2739 nt1.25□□□□□ -2.21
RSP5P39940 SPT7YBR081C 3999 nt1.25□□□□□ -2.21
RSP5P39940 RPS26AYGL189C 360 nt1.25□□□□□ -2.21
RSP5P39940 NST1YNL091W 3723 nt1.25□□□□□ -2.21
RSP5P39940 BEM3YPL115C 3387 nt1.25□□□□□ -2.21
RSP5P39940 YDR034C-AYDR034C-A 177 nt1.24□□□□□ -2.21
RSP5P39940 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
RSP5P39940 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
RSP5P39940 YGR130CYGR130C 2451 nt1.2□□□□□ -2.22
RSP5P39940 tN(GUU)QtN(GUU)Q 71 nt1.2□□□□□ -2.22
RSP5P39940 YOL164W-AYOL164W-A 183 nt1.2□□□□□ -2.22
RSP5P39940 YBR196C-AYBR196C-A 150 nt1.18□□□□□ -2.22
RSP5P39940 NNF2YGR089W 2811 nt1.18□□□□□ -2.22
RSP5P39940 YGR240C-AYGR240C-A 201 nt1.17□□□□□ -2.22
RSP5P39940 GLG1YKR058W 1851 nt1.17□□□□□ -2.22
RSP5P39940 ORC3YLL004W 1851 nt1.16□□□□□ -2.22
RSP5P39940 ANS1YHR126C 480 nt1.16□□□□□ -2.22
RSP5P39940 YLR286W-AYLR286W-A 135 nt1.16□□□□□ -2.22
RSP5P39940 SEC10YLR166C 2616 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
RSP5P39940 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
RSP5P39940 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
RSP5P39940 YPL060C-AYPL060C-A 3315 nt1.13□□□□□ -2.23
RSP5P39940 YBL100W-CYBL100W-C 120 nt1.13□□□□□ -2.23
RSP5P39940 snR53snR53 91 nt1.12□□□□□ -2.23
RSP5P39940 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
RSP5P39940 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
RSP5P39940 snR47snR47 99 nt1.11□□□□□ -2.23
RSP5P39940 ULP2YIL031W 3105 nt1.09□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms