Protein–RNA interactions for Protein: P39929

SNF7, Vacuolar-sorting protein SNF7, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF7P39929 snR190snR190 190 nt1.64□□□□□ -2.15
SNF7P39929 CHS6YJL099W 2241 nt1.64□□□□□ -2.15
SNF7P39929 YKL100W-AYKL100W-A 90 nt1.63□□□□□ -2.15
SNF7P39929 YML002WYML002W 2214 nt1.63□□□□□ -2.15
SNF7P39929 FYV10YIL097W 1551 nt1.62□□□□□ -2.15
SNF7P39929 KAP120YPL125W 3099 nt1.62□□□□□ -2.15
SNF7P39929 MSN5YDR335W 3675 nt1.62□□□□□ -2.15
SNF7P39929 UTP8YGR128C 2142 nt1.61□□□□□ -2.15
SNF7P39929 NUP145YGL092W 3954 nt1.61□□□□□ -2.15
SNF7P39929 YBR200W-AYBR200W-A 165 nt1.61□□□□□ -2.15
SNF7P39929 SPC110YDR356W 2835 nt1.6□□□□□ -2.15
SNF7P39929 SMC1YFL008W 3678 nt1.6□□□□□ -2.15
SNF7P39929 COG6YNL041C 2520 nt1.6□□□□□ -2.15
SNF7P39929 OST4YDL232W 111 nt1.59□□□□□ -2.15
SNF7P39929 SEC21YNL287W 2808 nt1.59□□□□□ -2.16
SNF7P39929 RPL26BYGR034W 384 nt1.57□□□□□ -2.16
SNF7P39929 YHR131W-AYHR131W-A 246 nt1.56□□□□□ -2.16
SNF7P39929 CLU1YMR012W 3834 nt1.56□□□□□ -2.16
SNF7P39929 QCR9YGR183C 201 nt1.54□□□□□ -2.16
SNF7P39929 PRP16YKR086W 3216 nt1.54□□□□□ -2.16
SNF7P39929 YNL067W-BYNL067W-B 141 nt1.53□□□□□ -2.16
SNF7P39929 IML1YJR138W 4755 nt1.52□□□□□ -2.17
SNF7P39929 YCR095W-AYCR095W-A 159 nt1.52□□□□□ -2.17
SNF7P39929 CDC25YLR310C 4770 nt1.51□□□□□ -2.17
SNF7P39929 YDL073WYDL073W 2955 nt1.51□□□□□ -2.17
SNF7P39929 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
SNF7P39929 YDR544CYDR544C 429 nt1.51□□□□□ -2.17
SNF7P39929 RAD9YDR217C 3930 nt1.5□□□□□ -2.17
SNF7P39929 tN(GUU)QtN(GUU)Q 71 nt1.5□□□□□ -2.17
SNF7P39929 YBR099CYBR099C 384 nt1.5□□□□□ -2.17
SNF7P39929 YLR232WYLR232W 348 nt1.49□□□□□ -2.17
SNF7P39929 YBL109WYBL109W 336 nt1.48□□□□□ -2.17
SNF7P39929 YDR210WYDR210W 228 nt1.47□□□□□ -2.17
SNF7P39929 YPR117WYPR117W 7470 nt1.47□□□□□ -2.17
SNF7P39929 SOM1YEL059C-A 225 nt1.46□□□□□ -2.18
SNF7P39929 YNL103W-AYNL103W-A 90 nt1.46□□□□□ -2.18
SNF7P39929 YPR160W-AYPR160W-A 81 nt1.46□□□□□ -2.18
SNF7P39929 SEC1YDR164C 2175 nt1.46□□□□□ -2.18
SNF7P39929 ROM2YLR371W 4071 nt1.46□□□□□ -2.18
SNF7P39929 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
SNF7P39929 RCO1YMR075W 2055 nt1.44□□□□□ -2.18
SNF7P39929 YGR130CYGR130C 2451 nt1.43□□□□□ -2.18
SNF7P39929 PMP2YEL017C-A 132 nt1.43□□□□□ -2.18
SNF7P39929 BUD3YCL014W 4911 nt1.43□□□□□ -2.18
SNF7P39929 tH(GUG)E1tH(GUG)E1 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)E2tH(GUG)E2 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)G1tH(GUG)G1 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)G2tH(GUG)G2 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)HtH(GUG)H 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)KtH(GUG)K 72 nt1.42□□□□□ -2.18
SNF7P39929 tH(GUG)MtH(GUG)M 72 nt1.42□□□□□ -2.18
SNF7P39929 YNL284C-BYNL284C-B 5268 nt1.41□□□□□ -2.18
SNF7P39929 MYO1YHR023W 5787 nt1.4□□□□□ -2.19
SNF7P39929 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
SNF7P39929 YLR399W-AYLR399W-A 105 nt1.39□□□□□ -2.19
SNF7P39929 UBP3YER151C 2739 nt1.39□□□□□ -2.19
SNF7P39929 BEM2YER155C 6504 nt1.39□□□□□ -2.19
SNF7P39929 TFB5YDR079C-A 219 nt1.38□□□□□ -2.19
SNF7P39929 YDR524C-AYDR524C-A 120 nt1.38□□□□□ -2.19
SNF7P39929 DOP1YDR141C 5097 nt1.37□□□□□ -2.19
SNF7P39929 tV(UAC)BtV(UAC)B 74 nt1.36□□□□□ -2.19
SNF7P39929 tV(UAC)DtV(UAC)D 74 nt1.36□□□□□ -2.19
SNF7P39929 YBR178WYBR178W 375 nt1.36□□□□□ -2.19
SNF7P39929 SPT7YBR081C 3999 nt1.36□□□□□ -2.19
SNF7P39929 SCC2YDR180W 4482 nt1.35□□□□□ -2.19
SNF7P39929 VAM6YDL077C 3150 nt1.34□□□□□ -2.19
SNF7P39929 STF2YGR008C 255 nt1.34□□□□□ -2.19
SNF7P39929 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
SNF7P39929 RPM2YML091C 3609 nt1.33□□□□□ -2.2
SNF7P39929 YPL060C-AYPL060C-A 3315 nt1.32□□□□□ -2.2
SNF7P39929 YJL127W-AYJL127W-A 117 nt1.31□□□□□ -2.2
SNF7P39929 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
SNF7P39929 snR61snR61 90 nt1.3□□□□□ -2.2
SNF7P39929 YGR146C-AYGR146C-A 162 nt1.3□□□□□ -2.2
SNF7P39929 NNF2YGR089W 2811 nt1.29□□□□□ -2.2
SNF7P39929 BIR1YJR089W 2865 nt1.28□□□□□ -2.2
SNF7P39929 YSP1YHR155W 3687 nt1.27□□□□□ -2.21
SNF7P39929 YMR326CYMR326C 309 nt1.25□□□□□ -2.21
SNF7P39929 NST1YNL091W 3723 nt1.24□□□□□ -2.21
SNF7P39929 YJR029WYJR029W 5268 nt1.23□□□□□ -2.21
SNF7P39929 YPR137C-BYPR137C-B 5268 nt1.23□□□□□ -2.21
SNF7P39929 YHR217CYHR217C 462 nt1.21□□□□□ -2.22
SNF7P39929 YBR072C-AYBR072C-A 162 nt1.21□□□□□ -2.22
SNF7P39929 ULP2YIL031W 3105 nt1.21□□□□□ -2.22
SNF7P39929 BEM3YPL115C 3387 nt1.2□□□□□ -2.22
SNF7P39929 YNL266WYNL266W 420 nt1.2□□□□□ -2.22
SNF7P39929 YGL041C-BYGL041C-B 183 nt1.18□□□□□ -2.22
SNF7P39929 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
SNF7P39929 BUL2YML111W 2763 nt1.17□□□□□ -2.22
SNF7P39929 SBH1YER087C-B 249 nt1.13□□□□□ -2.23
SNF7P39929 snR81snR81 201 nt1.12□□□□□ -2.23
SNF7P39929 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
SNF7P39929 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
SNF7P39929 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
SNF7P39929 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
SNF7P39929 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
SNF7P39929 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
SNF7P39929 YNL054W-BYNL054W-B 5250 nt1.09□□□□□ -2.23
SNF7P39929 YOR192C-BYOR192C-B 5313 nt1.09□□□□□ -2.23
SNF7P39929 SEC10YLR166C 2616 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms