Protein–RNA interactions for Protein: P39705

NUP60, Nucleoporin NUP60, yeastyeast

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP60P39705 SEC21YNL287W 2808 nt1.44□□□□□ -2.18
NUP60P39705 NUP188YML103C 4968 nt1.43□□□□□ -2.18
NUP60P39705 YCR095W-AYCR095W-A 159 nt1.43□□□□□ -2.18
NUP60P39705 YLR041WYLR041W 321 nt1.43□□□□□ -2.18
NUP60P39705 snR190snR190 190 nt1.43□□□□□ -2.18
NUP60P39705 YBR200W-AYBR200W-A 165 nt1.43□□□□□ -2.18
NUP60P39705 FYV10YIL097W 1551 nt1.42□□□□□ -2.18
NUP60P39705 RPL26BYGR034W 384 nt1.42□□□□□ -2.18
NUP60P39705 YNL067W-BYNL067W-B 141 nt1.42□□□□□ -2.18
NUP60P39705 AZF1YOR113W 2745 nt1.42□□□□□ -2.18
NUP60P39705 EST2YLR318W 2655 nt1.42□□□□□ -2.18
NUP60P39705 NUP145YGL092W 3954 nt1.41□□□□□ -2.18
NUP60P39705 ASE1YOR058C 2658 nt1.41□□□□□ -2.18
NUP60P39705 QCR9YGR183C 201 nt1.41□□□□□ -2.18
NUP60P39705 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
NUP60P39705 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
NUP60P39705 LAA1YJL207C 6045 nt1.4□□□□□ -2.19
NUP60P39705 SOM1YEL059C-A 225 nt1.39□□□□□ -2.19
NUP60P39705 STF2YGR008C 255 nt1.39□□□□□ -2.19
NUP60P39705 HUG1YML058W-A 207 nt1.39□□□□□ -2.19
NUP60P39705 snR39BsnR39B 96 nt1.39□□□□□ -2.19
NUP60P39705 YDR524C-AYDR524C-A 120 nt1.38□□□□□ -2.19
NUP60P39705 PMP2YEL017C-A 132 nt1.38□□□□□ -2.19
NUP60P39705 SEC3YER008C 4011 nt1.37□□□□□ -2.19
NUP60P39705 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
NUP60P39705 YLR232WYLR232W 348 nt1.37□□□□□ -2.19
NUP60P39705 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
NUP60P39705 IML1YJR138W 4755 nt1.36□□□□□ -2.19
NUP60P39705 YBL109WYBL109W 336 nt1.36□□□□□ -2.19
NUP60P39705 YBR178WYBR178W 375 nt1.36□□□□□ -2.19
NUP60P39705 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
NUP60P39705 YHR131W-AYHR131W-A 246 nt1.35□□□□□ -2.19
NUP60P39705 YDR544CYDR544C 429 nt1.34□□□□□ -2.19
NUP60P39705 tM(CAU)Q2tM(CAU)Q2 78 nt1.34□□□□□ -2.19
NUP60P39705 YNL103W-AYNL103W-A 90 nt1.34□□□□□ -2.19
NUP60P39705 TFB5YDR079C-A 219 nt1.33□□□□□ -2.2
NUP60P39705 MSN5YDR335W 3675 nt1.33□□□□□ -2.2
NUP60P39705 RAD9YDR217C 3930 nt1.32□□□□□ -2.2
NUP60P39705 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
NUP60P39705 SEC8YPR055W 3198 nt1.3□□□□□ -2.2
NUP60P39705 ROM2YLR371W 4071 nt1.28□□□□□ -2.2
NUP60P39705 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
NUP60P39705 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
NUP60P39705 YMR326CYMR326C 309 nt1.27□□□□□ -2.21
NUP60P39705 PRP16YKR086W 3216 nt1.27□□□□□ -2.21
NUP60P39705 snR61snR61 90 nt1.26□□□□□ -2.21
NUP60P39705 YDR210WYDR210W 228 nt1.25□□□□□ -2.21
NUP60P39705 YLR399W-AYLR399W-A 105 nt1.25□□□□□ -2.21
NUP60P39705 YPR160W-AYPR160W-A 81 nt1.25□□□□□ -2.21
NUP60P39705 tN(GUU)QtN(GUU)Q 71 nt1.24□□□□□ -2.21
NUP60P39705 YJL127W-AYJL127W-A 117 nt1.24□□□□□ -2.21
NUP60P39705 KAP120YPL125W 3099 nt1.24□□□□□ -2.21
NUP60P39705 COG6YNL041C 2520 nt1.24□□□□□ -2.21
NUP60P39705 SIP4YJL089W 2490 nt1.23□□□□□ -2.21
NUP60P39705 BEM3YPL115C 3387 nt1.22□□□□□ -2.21
NUP60P39705 CLU1YMR012W 3834 nt1.21□□□□□ -2.22
NUP60P39705 SEC1YDR164C 2175 nt1.2□□□□□ -2.22
NUP60P39705 YDL073WYDL073W 2955 nt1.19□□□□□ -2.22
NUP60P39705 YGR146C-AYGR146C-A 162 nt1.19□□□□□ -2.22
NUP60P39705 YHR217CYHR217C 462 nt1.18□□□□□ -2.22
NUP60P39705 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
NUP60P39705 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
NUP60P39705 RCO1YMR075W 2055 nt1.17□□□□□ -2.22
NUP60P39705 YSP1YHR155W 3687 nt1.16□□□□□ -2.22
NUP60P39705 VAM6YDL077C 3150 nt1.15□□□□□ -2.22
NUP60P39705 BIR1YJR089W 2865 nt1.15□□□□□ -2.23
NUP60P39705 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
NUP60P39705 YGL041C-BYGL041C-B 183 nt1.14□□□□□ -2.23
NUP60P39705 RPM2YML091C 3609 nt1.14□□□□□ -2.23
NUP60P39705 UBP3YER151C 2739 nt1.12□□□□□ -2.23
NUP60P39705 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
NUP60P39705 SBH1YER087C-B 249 nt1.12□□□□□ -2.23
NUP60P39705 YNL266WYNL266W 420 nt1.11□□□□□ -2.23
NUP60P39705 YBR072C-AYBR072C-A 162 nt1.11□□□□□ -2.23
NUP60P39705 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
NUP60P39705 BEM2YER155C 6504 nt1.1□□□□□ -2.23
NUP60P39705 GLG1YKR058W 1851 nt1.09□□□□□ -2.24
NUP60P39705 ULP2YIL031W 3105 nt1.06□□□□□ -2.24
NUP60P39705 DOP1YDR141C 5097 nt1.06□□□□□ -2.24
NUP60P39705 NNF2YGR089W 2811 nt1.06□□□□□ -2.24
NUP60P39705 NST1YNL091W 3723 nt1.05□□□□□ -2.24
NUP60P39705 RKR1YMR247C 4689 nt1.03□□□□□ -2.24
NUP60P39705 YDL247W-AYDL247W-A 75 nt1.02□□□□□ -2.25
NUP60P39705 snR81snR81 201 nt1.01□□□□□ -2.25
NUP60P39705 YLL006W-AYLL006W-A 177 nt0.99□□□□□ -2.25
NUP60P39705 SEC10YLR166C 2616 nt0.98□□□□□ -2.25
NUP60P39705 PAU12YGR294W 363 nt0.97□□□□□ -2.25
NUP60P39705 YAL037C-AYAL037C-A 93 nt0.97□□□□□ -2.25
NUP60P39705 YBR196C-AYBR196C-A 150 nt0.97□□□□□ -2.25
NUP60P39705 PAU24YBR301W 363 nt0.97□□□□□ -2.25
NUP60P39705 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
NUP60P39705 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
NUP60P39705 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
NUP60P39705 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
NUP60P39705 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms