Protein–RNA interactions for Protein: P38850

RTT107, Regulator of Ty1 transposition protein 107, yeastyeast

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT107P38850 YCS4YLR272C 3531 nt1.27□□□□□ -2.21
RTT107P38850 BFR2YDR299W 1605 nt1.26□□□□□ -2.21
RTT107P38850 TFB5YDR079C-A 219 nt1.26□□□□□ -2.21
RTT107P38850 YBR099CYBR099C 384 nt1.26□□□□□ -2.21
RTT107P38850 STO1YMR125W 2586 nt1.26□□□□□ -2.21
RTT107P38850 LAA1YJL207C 6045 nt1.26□□□□□ -2.21
RTT107P38850 NUP188YML103C 4968 nt1.26□□□□□ -2.21
RTT107P38850 CHS6YJL099W 2241 nt1.25□□□□□ -2.21
RTT107P38850 SET3YKR029C 2256 nt1.25□□□□□ -2.21
RTT107P38850 OST4YDL232W 111 nt1.24□□□□□ -2.21
RTT107P38850 YHR131W-AYHR131W-A 246 nt1.24□□□□□ -2.21
RTT107P38850 CDC39YCR093W 6327 nt1.24□□□□□ -2.21
RTT107P38850 ALY2YJL084C 3141 nt1.24□□□□□ -2.21
RTT107P38850 VAM6YDL077C 3150 nt1.23□□□□□ -2.21
RTT107P38850 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
RTT107P38850 YLR282CYLR282C 342 nt1.23□□□□□ -2.21
RTT107P38850 ASE1YOR058C 2658 nt1.23□□□□□ -2.21
RTT107P38850 MMS4YBR098W 2076 nt1.23□□□□□ -2.21
RTT107P38850 TAH1YCR060W 336 nt1.22□□□□□ -2.21
RTT107P38850 YDR544CYDR544C 429 nt1.22□□□□□ -2.21
RTT107P38850 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
RTT107P38850 QCR9YGR183C 201 nt1.21□□□□□ -2.22
RTT107P38850 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
RTT107P38850 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
RTT107P38850 UTP8YGR128C 2142 nt1.21□□□□□ -2.22
RTT107P38850 SMC1YFL008W 3678 nt1.2□□□□□ -2.22
RTT107P38850 COX5BYIL111W 456 nt1.2□□□□□ -2.22
RTT107P38850 YNL067W-BYNL067W-B 141 nt1.2□□□□□ -2.22
RTT107P38850 SWI4YER111C 3282 nt1.2□□□□□ -2.22
RTT107P38850 RCO1YMR075W 2055 nt1.19□□□□□ -2.22
RTT107P38850 APL3YBL037W 3078 nt1.18□□□□□ -2.22
RTT107P38850 SOM1YEL059C-A 225 nt1.18□□□□□ -2.22
RTT107P38850 YLL020CYLL020C 306 nt1.18□□□□□ -2.22
RTT107P38850 WAR1YML076C 2835 nt1.18□□□□□ -2.22
RTT107P38850 NOP9YJL010C 2001 nt1.18□□□□□ -2.22
RTT107P38850 PAN2YGL094C 3348 nt1.18□□□□□ -2.22
RTT107P38850 FYV10YIL097W 1551 nt1.17□□□□□ -2.22
RTT107P38850 SEC3YER008C 4011 nt1.17□□□□□ -2.22
RTT107P38850 COG6YNL041C 2520 nt1.17□□□□□ -2.22
RTT107P38850 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
RTT107P38850 NUP145YGL092W 3954 nt1.16□□□□□ -2.22
RTT107P38850 snR190snR190 190 nt1.15□□□□□ -2.23
RTT107P38850 SIP4YJL089W 2490 nt1.15□□□□□ -2.23
RTT107P38850 YML002WYML002W 2214 nt1.15□□□□□ -2.23
RTT107P38850 YLR041WYLR041W 321 nt1.14□□□□□ -2.23
RTT107P38850 NST1YNL091W 3723 nt1.14□□□□□ -2.23
RTT107P38850 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
RTT107P38850 IML1YJR138W 4755 nt1.13□□□□□ -2.23
RTT107P38850 YDR210WYDR210W 228 nt1.13□□□□□ -2.23
RTT107P38850 DOP1YDR141C 5097 nt1.12□□□□□ -2.23
RTT107P38850 YMR326CYMR326C 309 nt1.12□□□□□ -2.23
RTT107P38850 YGR130CYGR130C 2451 nt1.12□□□□□ -2.23
RTT107P38850 ROM2YLR371W 4071 nt1.11□□□□□ -2.23
RTT107P38850 snR61snR61 90 nt1.11□□□□□ -2.23
RTT107P38850 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
RTT107P38850 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
RTT107P38850 UBP3YER151C 2739 nt1.11□□□□□ -2.23
RTT107P38850 tN(GUU)QtN(GUU)Q 71 nt1.1□□□□□ -2.23
RTT107P38850 YHR217CYHR217C 462 nt1.1□□□□□ -2.23
RTT107P38850 YBR200W-AYBR200W-A 165 nt1.1□□□□□ -2.23
RTT107P38850 CLU1YMR012W 3834 nt1.1□□□□□ -2.23
RTT107P38850 YGL041C-BYGL041C-B 183 nt1.09□□□□□ -2.23
RTT107P38850 YKL100W-AYKL100W-A 90 nt1.09□□□□□ -2.23
RTT107P38850 SEC1YDR164C 2175 nt1.08□□□□□ -2.24
RTT107P38850 YLR232WYLR232W 348 nt1.08□□□□□ -2.24
RTT107P38850 tM(CAU)Q2tM(CAU)Q2 78 nt1.07□□□□□ -2.24
RTT107P38850 RPL26BYGR034W 384 nt1.07□□□□□ -2.24
RTT107P38850 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
RTT107P38850 YJL127W-AYJL127W-A 117 nt1.04□□□□□ -2.24
RTT107P38850 RKR1YMR247C 4689 nt1.03□□□□□ -2.24
RTT107P38850 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
RTT107P38850 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
RTT107P38850 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
RTT107P38850 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
RTT107P38850 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
RTT107P38850 snR81snR81 201 nt0.99□□□□□ -2.25
RTT107P38850 PAU24YBR301W 363 nt0.99□□□□□ -2.25
RTT107P38850 STF2YGR008C 255 nt0.98□□□□□ -2.25
RTT107P38850 YPR160W-AYPR160W-A 81 nt0.98□□□□□ -2.25
RTT107P38850 BIR1YJR089W 2865 nt0.98□□□□□ -2.25
RTT107P38850 PRP16YKR086W 3216 nt0.97□□□□□ -2.25
RTT107P38850 YNL266WYNL266W 420 nt0.97□□□□□ -2.25
RTT107P38850 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
RTT107P38850 YDL073WYDL073W 2955 nt0.95□□□□□ -2.26
RTT107P38850 tS(GCU)Q1tS(GCU)Q1 86 nt0.95□□□□□ -2.26
RTT107P38850 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
RTT107P38850 YDL247W-AYDL247W-A 75 nt0.94□□□□□ -2.26
RTT107P38850 SBH1YER087C-B 249 nt0.94□□□□□ -2.26
RTT107P38850 SEC8YPR055W 3198 nt0.94□□□□□ -2.26
RTT107P38850 YGR146C-AYGR146C-A 162 nt0.93□□□□□ -2.26
RTT107P38850 YLR399W-AYLR399W-A 105 nt0.91□□□□□ -2.26
RTT107P38850 BEM3YPL115C 3387 nt0.9□□□□□ -2.26
RTT107P38850 YOL083C-AYOL083C-A 141 nt0.9□□□□□ -2.27
RTT107P38850 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
RTT107P38850 YNL054W-BYNL054W-B 5250 nt0.89□□□□□ -2.27
RTT107P38850 YPR117WYPR117W 7470 nt0.88□□□□□ -2.27
RTT107P38850 YOR192C-BYOR192C-B 5313 nt0.88□□□□□ -2.27
RTT107P38850 YBL071C-BYBL071C-B 99 nt0.87□□□□□ -2.27
RTT107P38850 snR45snR45 172 nt0.86□□□□□ -2.27
RTT107P38850 YAL037C-AYAL037C-A 93 nt0.84□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms