Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.84■□□□□ 0.93
SCNN1AP37088 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.84■□□□□ 0.93
SCNN1AP37088 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCNN1AP37088 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.84■□□□□ 0.93
SCNN1AP37088 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.84■□□□□ 0.93
SCNN1AP37088 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 UNC93B5-201ENST00000530315 699 ntBASIC20.84■□□□□ 0.93
SCNN1AP37088 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.84■□□□□ 0.93
SCNN1AP37088 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.84■□□□□ 0.93
SCNN1AP37088 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.84■□□□□ 0.93
SCNN1AP37088 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.84■□□□□ 0.93
SCNN1AP37088 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCNN1AP37088 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.83■□□□□ 0.93
SCNN1AP37088 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.83■□□□□ 0.93
SCNN1AP37088 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SCNN1AP37088 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SCNN1AP37088 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.83■□□□□ 0.93
SCNN1AP37088 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.83■□□□□ 0.93
SCNN1AP37088 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCNN1AP37088 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCNN1AP37088 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.83■□□□□ 0.93
SCNN1AP37088 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.83■□□□□ 0.92
SCNN1AP37088 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.83■□□□□ 0.92
SCNN1AP37088 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.83■□□□□ 0.92
SCNN1AP37088 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.82■□□□□ 0.92
SCNN1AP37088 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.82■□□□□ 0.92
SCNN1AP37088 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.82■□□□□ 0.92
SCNN1AP37088 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 AC116351.2-201ENST00000606540 1585 ntBASIC20.82■□□□□ 0.92
SCNN1AP37088 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SCNN1AP37088 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.82■□□□□ 0.92
SCNN1AP37088 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.82■□□□□ 0.92
SCNN1AP37088 AC006557.6-201ENST00000623071 864 ntBASIC20.82■□□□□ 0.92
SCNN1AP37088 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.82■□□□□ 0.92
SCNN1AP37088 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCNN1AP37088 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SCNN1AP37088 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.81■□□□□ 0.92
SCNN1AP37088 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.81■□□□□ 0.92
SCNN1AP37088 UNC93B4-201ENST00000505679 747 ntBASIC20.81■□□□□ 0.92
SCNN1AP37088 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.81■□□□□ 0.92
SCNN1AP37088 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 KRT18P6-201ENST00000555540 1265 ntBASIC20.81■□□□□ 0.92
SCNN1AP37088 SOX15-203ENST00000570788 1093 ntBASIC20.81■□□□□ 0.92
SCNN1AP37088 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.81■□□□□ 0.92
SCNN1AP37088 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.81■□□□□ 0.92
SCNN1AP37088 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SCNN1AP37088 AC120498.8-201ENST00000614275 531 ntBASIC20.81■□□□□ 0.92
SCNN1AP37088 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.81■□□□□ 0.92
SCNN1AP37088 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCNN1AP37088 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SCNN1AP37088 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SCNN1AP37088 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SCNN1AP37088 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SCNN1AP37088 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.8■□□□□ 0.92
SCNN1AP37088 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.8■□□□□ 0.92
SCNN1AP37088 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.8■□□□□ 0.92
SCNN1AP37088 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.8■□□□□ 0.92
SCNN1AP37088 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.8■□□□□ 0.92
SCNN1AP37088 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCNN1AP37088 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms