Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.47■□□□□ 0.55
LCN1P31025 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LCN1P31025 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.47■□□□□ 0.55
LCN1P31025 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
LCN1P31025 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.47■□□□□ 0.55
LCN1P31025 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.47■□□□□ 0.55
LCN1P31025 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LCN1P31025 AC142086.2-201ENST00000569753 217 ntBASIC18.47■□□□□ 0.55
LCN1P31025 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.47■□□□□ 0.55
LCN1P31025 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.47■□□□□ 0.55
LCN1P31025 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCN1P31025 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCN1P31025 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.46■□□□□ 0.55
LCN1P31025 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.46■□□□□ 0.55
LCN1P31025 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.46■□□□□ 0.55
LCN1P31025 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.46■□□□□ 0.55
LCN1P31025 DUSP5P2-201ENST00000426873 1033 ntBASIC18.46■□□□□ 0.55
LCN1P31025 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.46■□□□□ 0.55
LCN1P31025 AC097658.1-201ENST00000475555 843 ntBASIC18.46■□□□□ 0.55
LCN1P31025 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.46■□□□□ 0.55
LCN1P31025 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 AC133041.1-202ENST00000642053 222 ntBASIC18.46■□□□□ 0.55
LCN1P31025 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LCN1P31025 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 KRT16P6-202ENST00000425692 1426 ntBASIC18.46■□□□□ 0.55
LCN1P31025 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.46■□□□□ 0.55
LCN1P31025 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCN1P31025 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LCN1P31025 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LCN1P31025 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.45■□□□□ 0.54
LCN1P31025 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.45■□□□□ 0.54
LCN1P31025 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LCN1P31025 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.45■□□□□ 0.54
LCN1P31025 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.45■□□□□ 0.54
LCN1P31025 AL138781.1-201ENST00000566567 1274 ntBASIC18.45■□□□□ 0.54
LCN1P31025 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.45■□□□□ 0.54
LCN1P31025 AC104771.1-201ENST00000603335 964 ntBASIC18.45■□□□□ 0.54
LCN1P31025 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 BX119927.1-201ENST00000636596 1552 ntBASIC18.45■□□□□ 0.54
LCN1P31025 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCN1P31025 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LCN1P31025 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.45■□□□□ 0.54
LCN1P31025 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.44■□□□□ 0.54
LCN1P31025 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.44■□□□□ 0.54
LCN1P31025 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 SMG8-203ENST00000578922 2178 ntBASIC18.44■□□□□ 0.54
LCN1P31025 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.44■□□□□ 0.54
LCN1P31025 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.44■□□□□ 0.54
LCN1P31025 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.44■□□□□ 0.54
LCN1P31025 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.44■□□□□ 0.54
LCN1P31025 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.44■□□□□ 0.54
LCN1P31025 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
LCN1P31025 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.44■□□□□ 0.54
LCN1P31025 MYC-209ENST00000641252 345 ntBASIC18.44■□□□□ 0.54
LCN1P31025 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCN1P31025 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms