Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN6P29350 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PTPN6P29350 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PTPN6P29350 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPN6P29350 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 NCF1B-203ENST00000435988 1254 ntBASIC18.96■□□□□ 0.63
PTPN6P29350 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN6P29350 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN6P29350 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN6P29350 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN6P29350 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN6P29350 PTBP1P-201ENST00000554374 1601 ntBASIC18.96■□□□□ 0.63
PTPN6P29350 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN6P29350 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN6P29350 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPN6P29350 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPN6P29350 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPN6P29350 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPN6P29350 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTPN6P29350 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN6P29350 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTPN6P29350 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN6P29350 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN6P29350 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
PTPN6P29350 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN6P29350 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PTPN6P29350 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN6P29350 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN6P29350 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN6P29350 CYP21A1P-202ENST00000354927 1481 ntBASIC18.94■□□□□ 0.62
PTPN6P29350 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN6P29350 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN6P29350 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN6P29350 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.93■□□□□ 0.62
PTPN6P29350 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 HLA-L-209ENST00000420110 1011 ntBASIC18.93■□□□□ 0.62
PTPN6P29350 CYP2T1P-201ENST00000432607 1285 ntBASIC18.93■□□□□ 0.62
PTPN6P29350 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN6P29350 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.93■□□□□ 0.62
PTPN6P29350 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.93■□□□□ 0.62
PTPN6P29350 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN6P29350 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN6P29350 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PTPN6P29350 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPN6P29350 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN6P29350 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN6P29350 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN6P29350 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN6P29350 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 AL591742.1-201ENST00000604433 565 ntBASIC18.92■□□□□ 0.62
PTPN6P29350 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
PTPN6P29350 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN6P29350 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN6P29350 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN6P29350 AC087289.5-201ENST00000586076 3175 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms