Protein–RNA interactions for Protein: P24004

PEX1, Peroxisomal ATPase PEX1, yeastyeast

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX1P24004 YBR200W-AYBR200W-A 165 nt1.44□□□□□ -2.18
PEX1P24004 YML002WYML002W 2214 nt1.44□□□□□ -2.18
PEX1P24004 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
PEX1P24004 AZF1YOR113W 2745 nt1.43□□□□□ -2.18
PEX1P24004 YBL039C-AYBL039C-A 84 nt1.43□□□□□ -2.18
PEX1P24004 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
PEX1P24004 NUP145YGL092W 3954 nt1.41□□□□□ -2.18
PEX1P24004 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
PEX1P24004 TAH1YCR060W 336 nt1.41□□□□□ -2.18
PEX1P24004 RPL26BYGR034W 384 nt1.41□□□□□ -2.18
PEX1P24004 snR190snR190 190 nt1.41□□□□□ -2.18
PEX1P24004 SEC21YNL287W 2808 nt1.41□□□□□ -2.18
PEX1P24004 EST2YLR318W 2655 nt1.41□□□□□ -2.18
PEX1P24004 STB6YKL072W 2301 nt1.4□□□□□ -2.19
PEX1P24004 FYV10YIL097W 1551 nt1.39□□□□□ -2.19
PEX1P24004 YOR329W-AYOR329W-A 210 nt1.39□□□□□ -2.19
PEX1P24004 ASE1YOR058C 2658 nt1.39□□□□□ -2.19
PEX1P24004 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
PEX1P24004 YLR041WYLR041W 321 nt1.36□□□□□ -2.19
PEX1P24004 SEC3YER008C 4011 nt1.36□□□□□ -2.19
PEX1P24004 QCR9YGR183C 201 nt1.35□□□□□ -2.19
PEX1P24004 PAU12YGR294W 363 nt1.35□□□□□ -2.19
PEX1P24004 PAU24YBR301W 363 nt1.35□□□□□ -2.19
PEX1P24004 MSN5YDR335W 3675 nt1.34□□□□□ -2.19
PEX1P24004 YNL284C-BYNL284C-B 5268 nt1.34□□□□□ -2.19
PEX1P24004 YNL067W-BYNL067W-B 141 nt1.34□□□□□ -2.19
PEX1P24004 CDC39YCR093W 6327 nt1.33□□□□□ -2.2
PEX1P24004 OST4YDL232W 111 nt1.33□□□□□ -2.2
PEX1P24004 YIL071W-AYIL071W-A 477 nt1.33□□□□□ -2.2
PEX1P24004 YLR232WYLR232W 348 nt1.33□□□□□ -2.2
PEX1P24004 LAA1YJL207C 6045 nt1.32□□□□□ -2.2
PEX1P24004 YCR095W-AYCR095W-A 159 nt1.32□□□□□ -2.2
PEX1P24004 YBR099CYBR099C 384 nt1.32□□□□□ -2.2
PEX1P24004 snR39BsnR39B 96 nt1.32□□□□□ -2.2
PEX1P24004 YDR544CYDR544C 429 nt1.31□□□□□ -2.2
PEX1P24004 tM(CAU)Q2tM(CAU)Q2 78 nt1.3□□□□□ -2.2
PEX1P24004 RAD9YDR217C 3930 nt1.3□□□□□ -2.2
PEX1P24004 IML1YJR138W 4755 nt1.3□□□□□ -2.2
PEX1P24004 SOM1YEL059C-A 225 nt1.29□□□□□ -2.2
PEX1P24004 SEC8YPR055W 3198 nt1.27□□□□□ -2.21
PEX1P24004 ROM2YLR371W 4071 nt1.26□□□□□ -2.21
PEX1P24004 YHR131W-AYHR131W-A 246 nt1.26□□□□□ -2.21
PEX1P24004 tV(UAC)BtV(UAC)B 74 nt1.26□□□□□ -2.21
PEX1P24004 tV(UAC)DtV(UAC)D 74 nt1.26□□□□□ -2.21
PEX1P24004 PRP16YKR086W 3216 nt1.25□□□□□ -2.21
PEX1P24004 PMP2YEL017C-A 132 nt1.24□□□□□ -2.21
PEX1P24004 KAP120YPL125W 3099 nt1.23□□□□□ -2.21
PEX1P24004 SIP4YJL089W 2490 nt1.23□□□□□ -2.21
PEX1P24004 CLU1YMR012W 3834 nt1.23□□□□□ -2.21
PEX1P24004 tN(GUU)QtN(GUU)Q 71 nt1.22□□□□□ -2.21
PEX1P24004 YLR399W-AYLR399W-A 105 nt1.22□□□□□ -2.21
PEX1P24004 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
PEX1P24004 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
PEX1P24004 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
PEX1P24004 BEM3YPL115C 3387 nt1.19□□□□□ -2.22
PEX1P24004 COG6YNL041C 2520 nt1.19□□□□□ -2.22
PEX1P24004 YDR210WYDR210W 228 nt1.19□□□□□ -2.22
PEX1P24004 YJL127W-AYJL127W-A 117 nt1.18□□□□□ -2.22
PEX1P24004 YNL103W-AYNL103W-A 90 nt1.18□□□□□ -2.22
PEX1P24004 NST1YNL091W 3723 nt1.17□□□□□ -2.22
PEX1P24004 YDL073WYDL073W 2955 nt1.16□□□□□ -2.22
PEX1P24004 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
PEX1P24004 YBL109WYBL109W 336 nt1.15□□□□□ -2.23
PEX1P24004 SEC1YDR164C 2175 nt1.14□□□□□ -2.23
PEX1P24004 TFB5YDR079C-A 219 nt1.14□□□□□ -2.23
PEX1P24004 YDR524C-AYDR524C-A 120 nt1.14□□□□□ -2.23
PEX1P24004 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
PEX1P24004 tF(GAA)BtF(GAA)B 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)FtF(GAA)F 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)GtF(GAA)G 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)H1tF(GAA)H1 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)H2tF(GAA)H2 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)MtF(GAA)M 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)P1tF(GAA)P1 73 nt1.13□□□□□ -2.23
PEX1P24004 tF(GAA)P2tF(GAA)P2 73 nt1.13□□□□□ -2.23
PEX1P24004 YSP1YHR155W 3687 nt1.12□□□□□ -2.23
PEX1P24004 BUD3YCL014W 4911 nt1.11□□□□□ -2.23
PEX1P24004 YGR146C-AYGR146C-A 162 nt1.11□□□□□ -2.23
PEX1P24004 UBP3YER151C 2739 nt1.1□□□□□ -2.23
PEX1P24004 snR61snR61 90 nt1.1□□□□□ -2.23
PEX1P24004 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
PEX1P24004 DOP1YDR141C 5097 nt1.09□□□□□ -2.24
PEX1P24004 YBR072C-AYBR072C-A 162 nt1.08□□□□□ -2.24
PEX1P24004 YBR178WYBR178W 375 nt1.08□□□□□ -2.24
PEX1P24004 RCO1YMR075W 2055 nt1.06□□□□□ -2.24
PEX1P24004 YMR326CYMR326C 309 nt1.06□□□□□ -2.24
PEX1P24004 BIR1YJR089W 2865 nt1.06□□□□□ -2.24
PEX1P24004 RPM2YML091C 3609 nt1.04□□□□□ -2.24
PEX1P24004 RKR1YMR247C 4689 nt1.04□□□□□ -2.24
PEX1P24004 GLG1YKR058W 1851 nt1.03□□□□□ -2.24
PEX1P24004 YNL266WYNL266W 420 nt1.03□□□□□ -2.24
PEX1P24004 YGL041C-BYGL041C-B 183 nt1.02□□□□□ -2.25
PEX1P24004 ULP2YIL031W 3105 nt1.01□□□□□ -2.25
PEX1P24004 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
PEX1P24004 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
PEX1P24004 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
PEX1P24004 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
PEX1P24004 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
PEX1P24004 NNF2YGR089W 2811 nt1□□□□□ -2.25
PEX1P24004 YHR217CYHR217C 462 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms