Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 PRORSD1P-201ENST00000295112 541 ntBASIC20.15■□□□□ 0.82
XPAP23025 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.15■□□□□ 0.82
XPAP23025 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
XPAP23025 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.15■□□□□ 0.82
XPAP23025 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.15■□□□□ 0.82
XPAP23025 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 AL031963.3-201ENST00000606441 850 ntBASIC20.15■□□□□ 0.82
XPAP23025 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.15■□□□□ 0.82
XPAP23025 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
XPAP23025 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.15■□□□□ 0.82
XPAP23025 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.15■□□□□ 0.82
XPAP23025 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
XPAP23025 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
XPAP23025 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
XPAP23025 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
XPAP23025 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
XPAP23025 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.14■□□□□ 0.81
XPAP23025 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
XPAP23025 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
XPAP23025 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
XPAP23025 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
XPAP23025 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.13■□□□□ 0.81
XPAP23025 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
XPAP23025 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.13■□□□□ 0.81
XPAP23025 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.13■□□□□ 0.81
XPAP23025 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.13■□□□□ 0.81
XPAP23025 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
XPAP23025 AC069544.1-201ENST00000609399 999 ntBASIC20.13■□□□□ 0.81
XPAP23025 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XPAP23025 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.13■□□□□ 0.81
XPAP23025 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.12■□□□□ 0.81
XPAP23025 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.12■□□□□ 0.81
XPAP23025 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 KRT8P17-201ENST00000453110 1448 ntBASIC20.12■□□□□ 0.81
XPAP23025 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.12■□□□□ 0.81
XPAP23025 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
XPAP23025 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.12■□□□□ 0.81
XPAP23025 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.12■□□□□ 0.81
XPAP23025 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.12■□□□□ 0.81
XPAP23025 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.12■□□□□ 0.81
XPAP23025 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 AL158047.1-201ENST00000445918 881 ntBASIC20.12■□□□□ 0.81
XPAP23025 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.12■□□□□ 0.81
XPAP23025 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
XPAP23025 AC142381.4-202ENST00000563973 229 ntBASIC20.12■□□□□ 0.81
XPAP23025 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.12■□□□□ 0.81
XPAP23025 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XPAP23025 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.12■□□□□ 0.81
XPAP23025 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
XPAP23025 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
XPAP23025 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.11■□□□□ 0.81
XPAP23025 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
XPAP23025 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
XPAP23025 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
XPAP23025 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms