Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 CYP21A1P-202ENST00000354927 1481 ntBASIC18.54■□□□□ 0.56
TNFRSF1BP20333 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 AC005332.7-201ENST00000614046 2005 ntBASIC18.54■□□□□ 0.56
TNFRSF1BP20333 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF1BP20333 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 AC097381.1-201ENST00000429019 1296 ntBASIC18.53■□□□□ 0.56
TNFRSF1BP20333 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 AC016405.3-201ENST00000607710 860 ntBASIC18.53■□□□□ 0.56
TNFRSF1BP20333 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF1BP20333 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.52■□□□□ 0.56
TNFRSF1BP20333 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF1BP20333 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 TERF1P5-201ENST00000477545 1207 ntBASIC18.51■□□□□ 0.55
TNFRSF1BP20333 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 AC010536.3-201ENST00000620306 533 ntBASIC18.51■□□□□ 0.55
TNFRSF1BP20333 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF1BP20333 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFRSF1BP20333 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms