Protein–RNA interactions for Protein: P20053

PRP4, U4/U6 small nuclear ribonucleoprotein PRP4, yeastyeast

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP4P20053 BST1YFL025C 3090 nt1.53□□□□□ -2.17
PRP4P20053 MON2YNL297C 4911 nt1.52□□□□□ -2.17
PRP4P20053 snR61snR61 90 nt1.52□□□□□ -2.17
PRP4P20053 snR190snR190 190 nt1.52□□□□□ -2.17
PRP4P20053 SSK2YNR031C 4740 nt1.52□□□□□ -2.17
PRP4P20053 SWI4YER111C 3282 nt1.51□□□□□ -2.17
PRP4P20053 STB6YKL072W 2301 nt1.51□□□□□ -2.17
PRP4P20053 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
PRP4P20053 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
PRP4P20053 NUP145YGL092W 3954 nt1.5□□□□□ -2.17
PRP4P20053 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
PRP4P20053 AZF1YOR113W 2745 nt1.49□□□□□ -2.17
PRP4P20053 STF2YGR008C 255 nt1.49□□□□□ -2.17
PRP4P20053 SAC3YDR159W 3906 nt1.49□□□□□ -2.17
PRP4P20053 CDC25YLR310C 4770 nt1.48□□□□□ -2.17
PRP4P20053 snR39BsnR39B 96 nt1.48□□□□□ -2.17
PRP4P20053 YLR419WYLR419W 4308 nt1.47□□□□□ -2.17
PRP4P20053 SXM1YDR395W 2835 nt1.47□□□□□ -2.17
PRP4P20053 YHR217CYHR217C 462 nt1.47□□□□□ -2.17
PRP4P20053 YLR041WYLR041W 321 nt1.46□□□□□ -2.18
PRP4P20053 YHR131W-AYHR131W-A 246 nt1.45□□□□□ -2.18
PRP4P20053 ROM2YLR371W 4071 nt1.45□□□□□ -2.18
PRP4P20053 PMD1YER132C 5262 nt1.45□□□□□ -2.18
PRP4P20053 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
PRP4P20053 BEM3YPL115C 3387 nt1.44□□□□□ -2.18
PRP4P20053 YJL127W-AYJL127W-A 117 nt1.43□□□□□ -2.18
PRP4P20053 NUP157YER105C 4176 nt1.42□□□□□ -2.18
PRP4P20053 RAD9YDR217C 3930 nt1.41□□□□□ -2.18
PRP4P20053 EST2YLR318W 2655 nt1.41□□□□□ -2.18
PRP4P20053 YDL247W-AYDL247W-A 75 nt1.41□□□□□ -2.18
PRP4P20053 SEC8YPR055W 3198 nt1.41□□□□□ -2.18
PRP4P20053 NUP188YML103C 4968 nt1.4□□□□□ -2.18
PRP4P20053 NUP192YJL039C 5052 nt1.4□□□□□ -2.19
PRP4P20053 SBH1YER087C-B 249 nt1.39□□□□□ -2.19
PRP4P20053 SEC3YER008C 4011 nt1.39□□□□□ -2.19
PRP4P20053 YDR210WYDR210W 228 nt1.38□□□□□ -2.19
PRP4P20053 YGL041C-BYGL041C-B 183 nt1.38□□□□□ -2.19
PRP4P20053 CLU1YMR012W 3834 nt1.37□□□□□ -2.19
PRP4P20053 MSN5YDR335W 3675 nt1.36□□□□□ -2.19
PRP4P20053 YDL073WYDL073W 2955 nt1.35□□□□□ -2.19
PRP4P20053 CAT8YMR280C 4302 nt1.35□□□□□ -2.19
PRP4P20053 YGR146C-AYGR146C-A 162 nt1.35□□□□□ -2.19
PRP4P20053 YLR399W-AYLR399W-A 105 nt1.35□□□□□ -2.19
PRP4P20053 COG6YNL041C 2520 nt1.35□□□□□ -2.19
PRP4P20053 KAP120YPL125W 3099 nt1.34□□□□□ -2.2
PRP4P20053 ASE1YOR058C 2658 nt1.33□□□□□ -2.2
PRP4P20053 ANS1YHR126C 480 nt1.3□□□□□ -2.2
PRP4P20053 RPM2YML091C 3609 nt1.29□□□□□ -2.2
PRP4P20053 BIR1YJR089W 2865 nt1.29□□□□□ -2.2
PRP4P20053 YPR160W-AYPR160W-A 81 nt1.29□□□□□ -2.2
PRP4P20053 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
PRP4P20053 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
PRP4P20053 YNL266WYNL266W 420 nt1.28□□□□□ -2.2
PRP4P20053 UBP3YER151C 2739 nt1.28□□□□□ -2.2
PRP4P20053 TRM732YMR259C 4263 nt1.27□□□□□ -2.21
PRP4P20053 SEC1YDR164C 2175 nt1.27□□□□□ -2.21
PRP4P20053 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
PRP4P20053 tN(GUU)QtN(GUU)Q 71 nt1.25□□□□□ -2.21
PRP4P20053 RCO1YMR075W 2055 nt1.22□□□□□ -2.21
PRP4P20053 YBR072C-AYBR072C-A 162 nt1.22□□□□□ -2.21
PRP4P20053 GLG1YKR058W 1851 nt1.21□□□□□ -2.22
PRP4P20053 CDC39YCR093W 6327 nt1.21□□□□□ -2.22
PRP4P20053 tH(GUG)E1tH(GUG)E1 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)E2tH(GUG)E2 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)G1tH(GUG)G1 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)G2tH(GUG)G2 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)HtH(GUG)H 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)KtH(GUG)K 72 nt1.2□□□□□ -2.22
PRP4P20053 tH(GUG)MtH(GUG)M 72 nt1.2□□□□□ -2.22
PRP4P20053 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
PRP4P20053 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
PRP4P20053 ULP2YIL031W 3105 nt1.18□□□□□ -2.22
PRP4P20053 YAL037C-AYAL037C-A 93 nt1.17□□□□□ -2.22
PRP4P20053 LAA1YJL207C 6045 nt1.17□□□□□ -2.22
PRP4P20053 YBR196C-AYBR196C-A 150 nt1.16□□□□□ -2.22
PRP4P20053 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
PRP4P20053 NST1YNL091W 3723 nt1.16□□□□□ -2.22
PRP4P20053 snR81snR81 201 nt1.14□□□□□ -2.23
PRP4P20053 BEM2YER155C 6504 nt1.13□□□□□ -2.23
PRP4P20053 YIL142C-AYIL142C-A 333 nt1.11□□□□□ -2.23
PRP4P20053 CSE1YGL238W 2883 nt1.11□□□□□ -2.23
PRP4P20053 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
PRP4P20053 SEC10YLR166C 2616 nt1.11□□□□□ -2.23
PRP4P20053 tS(GCU)Q1tS(GCU)Q1 86 nt1.1□□□□□ -2.23
PRP4P20053 tV(UAC)BtV(UAC)B 74 nt1.1□□□□□ -2.23
PRP4P20053 tV(UAC)DtV(UAC)D 74 nt1.1□□□□□ -2.23
PRP4P20053 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
PRP4P20053 HUG1YML058W-A 207 nt1.1□□□□□ -2.23
PRP4P20053 YOL083C-AYOL083C-A 141 nt1.1□□□□□ -2.23
PRP4P20053 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
PRP4P20053 NNF2YGR089W 2811 nt1.08□□□□□ -2.24
PRP4P20053 IML1YJR138W 4755 nt1.07□□□□□ -2.24
PRP4P20053 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
PRP4P20053 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
PRP4P20053 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
PRP4P20053 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
PRP4P20053 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
PRP4P20053 YBL100W-CYBL100W-C 120 nt1.05□□□□□ -2.24
PRP4P20053 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
PRP4P20053 YLL066W-BYLL066W-B 171 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms