Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFRAP16234 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 TCF3P1-201ENST00000423021 1937 ntBASIC20.98■□□□□ 0.95
PDGFRAP16234 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PDGFRAP16234 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 KRT8P20-201ENST00000423953 1409 ntBASIC20.98■□□□□ 0.95
PDGFRAP16234 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.98■□□□□ 0.95
PDGFRAP16234 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.98■□□□□ 0.95
PDGFRAP16234 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFRAP16234 AC083880.1-201ENST00000608266 535 ntBASIC20.98■□□□□ 0.95
PDGFRAP16234 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.98■□□□□ 0.95
PDGFRAP16234 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDGFRAP16234 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.97■□□□□ 0.95
PDGFRAP16234 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PDGFRAP16234 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDGFRAP16234 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PDGFRAP16234 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PDGFRAP16234 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFRAP16234 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFRAP16234 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.96■□□□□ 0.95
PDGFRAP16234 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 AC023632.3-201ENST00000521633 145 ntBASIC20.96■□□□□ 0.95
PDGFRAP16234 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PDGFRAP16234 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.96■□□□□ 0.95
PDGFRAP16234 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
PDGFRAP16234 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.96■□□□□ 0.95
PDGFRAP16234 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDGFRAP16234 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 AL691432.2-201ENST00000607222 2038 ntBASIC20.95■□□□□ 0.94
PDGFRAP16234 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 SLC25A24-204ENST00000569674 2357 ntBASIC20.95■□□□□ 0.94
PDGFRAP16234 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 HLA-G-202ENST00000376815 851 ntBASIC20.95■□□□□ 0.94
PDGFRAP16234 HLA-G-203ENST00000376818 1127 ntBASIC20.95■□□□□ 0.94
PDGFRAP16234 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.95■□□□□ 0.94
PDGFRAP16234 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDGFRAP16234 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.95■□□□□ 0.94
PDGFRAP16234 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFRAP16234 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PDGFRAP16234 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 RNA5SP413-201ENST00000516373 109 ntBASIC20.94■□□□□ 0.94
PDGFRAP16234 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.94■□□□□ 0.94
PDGFRAP16234 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PDGFRAP16234 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.94■□□□□ 0.94
PDGFRAP16234 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.94■□□□□ 0.94
PDGFRAP16234 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFRAP16234 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFRAP16234 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFRAP16234 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.93■□□□□ 0.94
PDGFRAP16234 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms