Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPRP12270 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.83■□□□□ 0.6
TPRP12270 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
TPRP12270 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
TPRP12270 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.82■□□□□ 0.6
TPRP12270 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPRP12270 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TPRP12270 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.82■□□□□ 0.6
TPRP12270 AF228730.7-201ENST00000641842 219 ntBASIC18.82■□□□□ 0.6
TPRP12270 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.82■□□□□ 0.6
TPRP12270 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
TPRP12270 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.81■□□□□ 0.6
TPRP12270 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TPRP12270 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TPRP12270 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.81■□□□□ 0.6
TPRP12270 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.81■□□□□ 0.6
TPRP12270 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.81■□□□□ 0.6
TPRP12270 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.81■□□□□ 0.6
TPRP12270 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.81■□□□□ 0.6
TPRP12270 AL023973.1-201ENST00000624619 620 ntBASIC18.81■□□□□ 0.6
TPRP12270 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 AC116562.4-202ENST00000641738 218 ntBASIC18.81■□□□□ 0.6
TPRP12270 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.81■□□□□ 0.6
TPRP12270 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.81■□□□□ 0.6
TPRP12270 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TPRP12270 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TPRP12270 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.81■□□□□ 0.6
TPRP12270 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.81■□□□□ 0.6
TPRP12270 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.81■□□□□ 0.6
TPRP12270 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPRP12270 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.8■□□□□ 0.6
TPRP12270 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 KRT18P58-201ENST00000527480 1120 ntBASIC18.8■□□□□ 0.6
TPRP12270 AL441883.1-201ENST00000566170 1045 ntBASIC18.8■□□□□ 0.6
TPRP12270 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TPRP12270 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TPRP12270 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPRP12270 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.8■□□□□ 0.6
TPRP12270 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.79■□□□□ 0.6
TPRP12270 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TPRP12270 AC141257.4-201ENST00000634557 245 ntBASIC18.79■□□□□ 0.6
TPRP12270 AC136944.6-201ENST00000634818 245 ntBASIC18.79■□□□□ 0.6
TPRP12270 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.79■□□□□ 0.6
TPRP12270 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
TPRP12270 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.79■□□□□ 0.6
TPRP12270 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.79■□□□□ 0.6
TPRP12270 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPRP12270 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.79■□□□□ 0.6
TPRP12270 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.78■□□□□ 0.6
TPRP12270 MIR574-201ENST00000385209 96 ntBASIC18.78■□□□□ 0.6
TPRP12270 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.78■□□□□ 0.6
TPRP12270 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.78■□□□□ 0.6
TPRP12270 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.78■□□□□ 0.6
TPRP12270 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.78■□□□□ 0.6
TPRP12270 AC140113.2-201ENST00000604370 208 ntBASIC18.78■□□□□ 0.6
TPRP12270 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TPRP12270 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TPRP12270 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms