Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.82■□□□□ 0.12
PF4V1P10720 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.82■□□□□ 0.12
PF4V1P10720 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PF4V1P10720 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
PF4V1P10720 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PF4V1P10720 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PF4V1P10720 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.81■□□□□ 0.12
PF4V1P10720 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PF4V1P10720 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PF4V1P10720 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
PF4V1P10720 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PF4V1P10720 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PF4V1P10720 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
PF4V1P10720 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.8■□□□□ 0.12
PF4V1P10720 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
PF4V1P10720 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 AC092720.2-201ENST00000602388 1665 ntBASIC15.8■□□□□ 0.12
PF4V1P10720 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PF4V1P10720 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PF4V1P10720 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PF4V1P10720 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PF4V1P10720 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.8■□□□□ 0.12
PF4V1P10720 UBE2SP1-201ENST00000450587 669 ntBASIC15.8■□□□□ 0.12
PF4V1P10720 C1QBPP2-201ENST00000528754 825 ntBASIC15.8■□□□□ 0.12
PF4V1P10720 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.8■□□□□ 0.12
PF4V1P10720 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
PF4V1P10720 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.8■□□□□ 0.12
PF4V1P10720 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.8■□□□□ 0.12
PF4V1P10720 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.8■□□□□ 0.12
PF4V1P10720 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PF4V1P10720 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.8■□□□□ 0.12
PF4V1P10720 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.79■□□□□ 0.12
PF4V1P10720 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.79■□□□□ 0.12
PF4V1P10720 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PF4V1P10720 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.79■□□□□ 0.12
PF4V1P10720 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.79■□□□□ 0.12
PF4V1P10720 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.79■□□□□ 0.12
PF4V1P10720 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.79■□□□□ 0.12
PF4V1P10720 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PF4V1P10720 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PF4V1P10720 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.79■□□□□ 0.12
PF4V1P10720 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PF4V1P10720 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.79■□□□□ 0.12
PF4V1P10720 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.78■□□□□ 0.12
PF4V1P10720 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PF4V1P10720 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.78■□□□□ 0.12
PF4V1P10720 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 MIR718-201ENST00000390190 70 ntBASIC15.78■□□□□ 0.12
PF4V1P10720 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.78■□□□□ 0.12
PF4V1P10720 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.78■□□□□ 0.12
PF4V1P10720 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.78■□□□□ 0.12
PF4V1P10720 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.78■□□□□ 0.12
PF4V1P10720 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PF4V1P10720 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms