Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 TAH1YCR060W 336 nt1.13□□□□□ -2.23
RPL42BP0CX28 YOR329W-AYOR329W-A 210 nt1.13□□□□□ -2.23
RPL42BP0CX28 SEC21YNL287W 2808 nt1.13□□□□□ -2.23
RPL42BP0CX28 tQ(UUG)E2tQ(UUG)E2 72 nt1.12□□□□□ -2.23
RPL42BP0CX28 YCL001W-BYCL001W-B 255 nt1.12□□□□□ -2.23
RPL42BP0CX28 ASE1YOR058C 2658 nt1.11□□□□□ -2.23
RPL42BP0CX28 SEC8YPR055W 3198 nt1.1□□□□□ -2.23
RPL42BP0CX28 CAT8YMR280C 4302 nt1.09□□□□□ -2.23
RPL42BP0CX28 STB6YKL072W 2301 nt1.09□□□□□ -2.23
RPL42BP0CX28 YLR232WYLR232W 348 nt1.09□□□□□ -2.23
RPL42BP0CX28 SPC110YDR356W 2835 nt1.08□□□□□ -2.24
RPL42BP0CX28 CDC39YCR093W 6327 nt1.08□□□□□ -2.24
RPL42BP0CX28 KAP120YPL125W 3099 nt1.07□□□□□ -2.24
RPL42BP0CX28 QCR9YGR183C 201 nt1.06□□□□□ -2.24
RPL42BP0CX28 YNL067W-BYNL067W-B 141 nt1.06□□□□□ -2.24
RPL42BP0CX28 RPM2YML091C 3609 nt1.06□□□□□ -2.24
RPL42BP0CX28 RAD9YDR217C 3930 nt1.05□□□□□ -2.24
RPL42BP0CX28 YCR095W-AYCR095W-A 159 nt1.05□□□□□ -2.24
RPL42BP0CX28 YLR399W-AYLR399W-A 105 nt1.05□□□□□ -2.24
RPL42BP0CX28 OST4YDL232W 111 nt1.04□□□□□ -2.24
RPL42BP0CX28 YIL071W-AYIL071W-A 477 nt1.04□□□□□ -2.24
RPL42BP0CX28 HKR1YDR420W 5409 nt1.04□□□□□ -2.24
RPL42BP0CX28 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
RPL42BP0CX28 tM(CAU)Q2tM(CAU)Q2 78 nt1.03□□□□□ -2.24
RPL42BP0CX28 YHR131W-AYHR131W-A 246 nt1.03□□□□□ -2.24
RPL42BP0CX28 YBL109WYBL109W 336 nt1.03□□□□□ -2.24
RPL42BP0CX28 YNL284C-BYNL284C-B 5268 nt1.03□□□□□ -2.24
RPL42BP0CX28 NUP192YJL039C 5052 nt1.02□□□□□ -2.25
RPL42BP0CX28 YPR160W-AYPR160W-A 81 nt1.02□□□□□ -2.25
RPL42BP0CX28 SOM1YEL059C-A 225 nt1.01□□□□□ -2.25
RPL42BP0CX28 YBR099CYBR099C 384 nt1□□□□□ -2.25
RPL42BP0CX28 BEM3YPL115C 3387 nt1□□□□□ -2.25
RPL42BP0CX28 YDR524C-AYDR524C-A 120 nt0.99□□□□□ -2.25
RPL42BP0CX28 YDR544CYDR544C 429 nt0.99□□□□□ -2.25
RPL42BP0CX28 snR39BsnR39B 96 nt0.99□□□□□ -2.25
RPL42BP0CX28 PMP2YEL017C-A 132 nt0.98□□□□□ -2.25
RPL42BP0CX28 YNL103W-AYNL103W-A 90 nt0.98□□□□□ -2.25
RPL42BP0CX28 LAA1YJL207C 6045 nt0.98□□□□□ -2.25
RPL42BP0CX28 YSP1YHR155W 3687 nt0.97□□□□□ -2.25
RPL42BP0CX28 tN(GUU)QtN(GUU)Q 71 nt0.97□□□□□ -2.25
RPL42BP0CX28 YBR178WYBR178W 375 nt0.96□□□□□ -2.26
RPL42BP0CX28 COG6YNL041C 2520 nt0.96□□□□□ -2.26
RPL42BP0CX28 MSH3YCR092C 3057 nt0.96□□□□□ -2.26
RPL42BP0CX28 TFB5YDR079C-A 219 nt0.95□□□□□ -2.26
RPL42BP0CX28 UBP3YER151C 2739 nt0.95□□□□□ -2.26
RPL42BP0CX28 YDL073WYDL073W 2955 nt0.95□□□□□ -2.26
RPL42BP0CX28 tH(GUG)E1tH(GUG)E1 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)E2tH(GUG)E2 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)G1tH(GUG)G1 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)G2tH(GUG)G2 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)HtH(GUG)H 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)KtH(GUG)K 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 tH(GUG)MtH(GUG)M 72 nt0.94□□□□□ -2.26
RPL42BP0CX28 STF2YGR008C 255 nt0.94□□□□□ -2.26
RPL42BP0CX28 YJL127W-AYJL127W-A 117 nt0.94□□□□□ -2.26
RPL42BP0CX28 YDR210WYDR210W 228 nt0.93□□□□□ -2.26
RPL42BP0CX28 MYO1YHR023W 5787 nt0.93□□□□□ -2.26
RPL42BP0CX28 YGR146C-AYGR146C-A 162 nt0.92□□□□□ -2.26
RPL42BP0CX28 SPT7YBR081C 3999 nt0.92□□□□□ -2.26
RPL42BP0CX28 YGR130CYGR130C 2451 nt0.9□□□□□ -2.27
RPL42BP0CX28 YJR029WYJR029W 5268 nt0.89□□□□□ -2.27
RPL42BP0CX28 YPR137C-BYPR137C-B 5268 nt0.89□□□□□ -2.27
RPL42BP0CX28 ULP2YIL031W 3105 nt0.89□□□□□ -2.27
RPL42BP0CX28 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
RPL42BP0CX28 YBR072C-AYBR072C-A 162 nt0.88□□□□□ -2.27
RPL42BP0CX28 GLG1YKR058W 1851 nt0.88□□□□□ -2.27
RPL42BP0CX28 RCO1YMR075W 2055 nt0.87□□□□□ -2.27
RPL42BP0CX28 YMR326CYMR326C 309 nt0.87□□□□□ -2.27
RPL42BP0CX28 VAM6YDL077C 3150 nt0.86□□□□□ -2.27
RPL42BP0CX28 BUD3YCL014W 4911 nt0.85□□□□□ -2.27
RPL42BP0CX28 snR61snR61 90 nt0.85□□□□□ -2.27
RPL42BP0CX28 SCC2YDR180W 4482 nt0.85□□□□□ -2.27
RPL42BP0CX28 NST1YNL091W 3723 nt0.84□□□□□ -2.27
RPL42BP0CX28 BIR1YJR089W 2865 nt0.84□□□□□ -2.28
RPL42BP0CX28 YHR217CYHR217C 462 nt0.83□□□□□ -2.28
RPL42BP0CX28 tV(UAC)BtV(UAC)B 74 nt0.83□□□□□ -2.28
RPL42BP0CX28 tV(UAC)DtV(UAC)D 74 nt0.83□□□□□ -2.28
RPL42BP0CX28 YGL041C-BYGL041C-B 183 nt0.82□□□□□ -2.28
RPL42BP0CX28 SIP4YJL089W 2490 nt0.81□□□□□ -2.28
RPL42BP0CX28 YLL006W-AYLL006W-A 177 nt0.8□□□□□ -2.28
RPL42BP0CX28 LTE1YAL024C 4308 nt0.79□□□□□ -2.28
RPL42BP0CX28 YNL266WYNL266W 420 nt0.79□□□□□ -2.28
RPL42BP0CX28 NNF2YGR089W 2811 nt0.79□□□□□ -2.28
RPL42BP0CX28 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
RPL42BP0CX28 IML1YJR138W 4755 nt0.78□□□□□ -2.28
RPL42BP0CX28 RKR1YMR247C 4689 nt0.77□□□□□ -2.29
RPL42BP0CX28 BEM2YER155C 6504 nt0.76□□□□□ -2.29
RPL42BP0CX28 EMT1tM(CAU)D 73 nt0.75□□□□□ -2.29
RPL42BP0CX28 EMT5tM(CAU)J1 73 nt0.75□□□□□ -2.29
RPL42BP0CX28 EMT3tM(CAU)J2 73 nt0.75□□□□□ -2.29
RPL42BP0CX28 EMT4tM(CAU)M 73 nt0.75□□□□□ -2.29
RPL42BP0CX28 EMT2tM(CAU)O2 73 nt0.75□□□□□ -2.29
RPL42BP0CX28 CSE1YGL238W 2883 nt0.74□□□□□ -2.29
RPL42BP0CX28 snR81snR81 201 nt0.73□□□□□ -2.29
RPL42BP0CX28 SBH1YER087C-B 249 nt0.73□□□□□ -2.29
RPL42BP0CX28 HUG1YML058W-A 207 nt0.73□□□□□ -2.29
RPL42BP0CX28 SEC10YLR166C 2616 nt0.71□□□□□ -2.3
RPL42BP0CX28 NIP1YMR309C 2439 nt0.7□□□□□ -2.3
RPL42BP0CX28 YDL247W-AYDL247W-A 75 nt0.7□□□□□ -2.3
RPL42BP0CX28 YBR196C-AYBR196C-A 150 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms