Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC022616.7-201ENST00000525383 220 ntBASIC20.29■□□□□ 0.84
COL4A2P08572 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.29■□□□□ 0.84
COL4A2P08572 AL121603.2-201ENST00000557373 2117 ntBASIC20.28■□□□□ 0.84
COL4A2P08572 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL4A2P08572 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL4A2P08572 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL4A2P08572 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A2P08572 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A2P08572 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 MYC-208ENST00000641036 567 ntBASIC20.28■□□□□ 0.84
COL4A2P08572 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL4A2P08572 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.28■□□□□ 0.84
COL4A2P08572 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COL4A2P08572 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A2P08572 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
COL4A2P08572 ARMC10P1-201ENST00000313754 855 ntBASIC20.27■□□□□ 0.84
COL4A2P08572 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
COL4A2P08572 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.27■□□□□ 0.84
COL4A2P08572 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.27■□□□□ 0.84
COL4A2P08572 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A2P08572 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A2P08572 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A2P08572 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A2P08572 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.27■□□□□ 0.84
COL4A2P08572 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A2P08572 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A2P08572 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A2P08572 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A2P08572 HLA-G-202ENST00000376815 851 ntBASIC20.27■□□□□ 0.83
COL4A2P08572 HLA-G-203ENST00000376818 1127 ntBASIC20.27■□□□□ 0.83
COL4A2P08572 AC104076.2-201ENST00000448912 469 ntBASIC20.27■□□□□ 0.83
COL4A2P08572 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A2P08572 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.27■□□□□ 0.83
COL4A2P08572 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.27■□□□□ 0.83
COL4A2P08572 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.27■□□□□ 0.83
COL4A2P08572 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.27■□□□□ 0.83
COL4A2P08572 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.27■□□□□ 0.83
COL4A2P08572 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL4A2P08572 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.26■□□□□ 0.83
COL4A2P08572 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A2P08572 ECEL1P2-202ENST00000465689 757 ntBASIC20.26■□□□□ 0.83
COL4A2P08572 AL590326.2-201ENST00000625139 305 ntBASIC20.26■□□□□ 0.83
COL4A2P08572 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.26■□□□□ 0.83
COL4A2P08572 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
COL4A2P08572 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 FSCN1P1-201ENST00000568912 1481 ntBASIC20.25■□□□□ 0.83
COL4A2P08572 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL4A2P08572 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.25■□□□□ 0.83
COL4A2P08572 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.25■□□□□ 0.83
COL4A2P08572 AC011506.1-201ENST00000474329 610 ntBASIC20.25■□□□□ 0.83
COL4A2P08572 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.25■□□□□ 0.83
COL4A2P08572 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.25■□□□□ 0.83
COL4A2P08572 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.25■□□□□ 0.83
COL4A2P08572 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.25■□□□□ 0.83
COL4A2P08572 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.25■□□□□ 0.83
COL4A2P08572 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A2P08572 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL4A2P08572 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.24■□□□□ 0.83
COL4A2P08572 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL4A2P08572 AC004980.1-204ENST00000429707 299 ntBASIC20.24■□□□□ 0.83
COL4A2P08572 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL4A2P08572 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL4A2P08572 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.24■□□□□ 0.83
COL4A2P08572 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.24■□□□□ 0.83
COL4A2P08572 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A2P08572 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms