Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL136116.3-201ENST00000402907 1138 ntBASIC17.26■□□□□ 0.35
HLA-DQB1P01920 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB1P01920 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 IGHV3-19-201ENST00000521488 291 ntBASIC17.25■□□□□ 0.35
HLA-DQB1P01920 AC126544.1-201ENST00000580842 1059 ntBASIC17.25■□□□□ 0.35
HLA-DQB1P01920 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB1P01920 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB1P01920 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 DPP3P2-201ENST00000416030 1696 ntBASIC17.23■□□□□ 0.35
HLA-DQB1P01920 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB1P01920 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 AC104581.1-202ENST00000635932 2618 ntBASIC17.22■□□□□ 0.35
HLA-DQB1P01920 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms