Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SIX3O95343 AL355472.2-201ENST00000422958 438 ntBASIC19.53■□□□□ 0.72
SIX3O95343 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.53■□□□□ 0.72
SIX3O95343 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.53■□□□□ 0.72
SIX3O95343 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.53■□□□□ 0.72
SIX3O95343 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 BID-214ENST00000617586 542 ntTSL 5 BASIC19.53■□□□□ 0.72
SIX3O95343 AC105020.6-201ENST00000621523 1217 ntBASIC19.53■□□□□ 0.72
SIX3O95343 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SIX3O95343 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SIX3O95343 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX3O95343 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SIX3O95343 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SIX3O95343 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 KRT18P68-201ENST00000392293 1000 ntBASIC19.52■□□□□ 0.72
SIX3O95343 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.52■□□□□ 0.72
SIX3O95343 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SIX3O95343 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX3O95343 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SIX3O95343 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX3O95343 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.52■□□□□ 0.71
SIX3O95343 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX3O95343 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX3O95343 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX3O95343 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX3O95343 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
SIX3O95343 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX3O95343 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX3O95343 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIX3O95343 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.5■□□□□ 0.71
SIX3O95343 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.5■□□□□ 0.71
SIX3O95343 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SIX3O95343 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 CYP2T3P-201ENST00000601990 817 ntBASIC19.5■□□□□ 0.71
SIX3O95343 MIR5787-201ENST00000611784 55 ntBASIC19.5■□□□□ 0.71
SIX3O95343 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.5■□□□□ 0.71
SIX3O95343 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX3O95343 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SIX3O95343 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
SIX3O95343 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SIX3O95343 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 AC087289.5-201ENST00000586076 3175 ntBASIC19.49■□□□□ 0.71
SIX3O95343 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SIX3O95343 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SIX3O95343 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.49■□□□□ 0.71
SIX3O95343 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.49■□□□□ 0.71
SIX3O95343 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SIX3O95343 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 AC069236.1-201ENST00000604339 616 ntBASIC19.49■□□□□ 0.71
SIX3O95343 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.49■□□□□ 0.71
SIX3O95343 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.49■□□□□ 0.71
SIX3O95343 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.49■□□□□ 0.71
SIX3O95343 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SIX3O95343 KRT8P17-201ENST00000453110 1448 ntBASIC19.49■□□□□ 0.71
SIX3O95343 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.49■□□□□ 0.71
SIX3O95343 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX3O95343 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX3O95343 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX3O95343 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms