Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
RFPL1O75677 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL1O75677 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
RFPL1O75677 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL1O75677 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL1O75677 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL1O75677 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.03■□□□□ 0.8
RFPL1O75677 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL1O75677 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RFPL1O75677 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.03■□□□□ 0.8
RFPL1O75677 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL1O75677 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL1O75677 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 AC005181.1-201ENST00000604782 1256 ntBASIC20.03■□□□□ 0.8
RFPL1O75677 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL1O75677 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL1O75677 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL1O75677 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.03■□□□□ 0.8
RFPL1O75677 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RFPL1O75677 AC093484.2-201ENST00000580996 2166 ntBASIC20.02■□□□□ 0.8
RFPL1O75677 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.02■□□□□ 0.8
RFPL1O75677 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL1O75677 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFPL1O75677 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RFPL1O75677 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL1O75677 TSPY6P-201ENST00000448518 926 ntBASIC20.02■□□□□ 0.8
RFPL1O75677 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.02■□□□□ 0.8
RFPL1O75677 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.02■□□□□ 0.8
RFPL1O75677 UBE2DNL-204ENST00000602536 740 ntBASIC20.02■□□□□ 0.8
RFPL1O75677 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.02■□□□□ 0.8
RFPL1O75677 AL050303.2-201ENST00000619798 666 ntBASIC20.02■□□□□ 0.8
RFPL1O75677 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.02■□□□□ 0.8
RFPL1O75677 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFPL1O75677 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL1O75677 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.02■□□□□ 0.8
RFPL1O75677 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.02■□□□□ 0.8
RFPL1O75677 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFPL1O75677 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL1O75677 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFPL1O75677 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.79
RFPL1O75677 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.02■□□□□ 0.79
RFPL1O75677 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.01■□□□□ 0.79
RFPL1O75677 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFPL1O75677 SLC29A4P1-201ENST00000398760 971 ntBASIC20.01■□□□□ 0.79
RFPL1O75677 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.01■□□□□ 0.79
RFPL1O75677 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.01■□□□□ 0.79
RFPL1O75677 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 AP000974.1-201ENST00000623909 2387 ntBASIC20.01■□□□□ 0.79
RFPL1O75677 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFPL1O75677 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20■□□□□ 0.79
RFPL1O75677 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20■□□□□ 0.79
RFPL1O75677 DUX4L16-201ENST00000555130 1264 ntBASIC20■□□□□ 0.79
RFPL1O75677 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20■□□□□ 0.79
RFPL1O75677 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFPL1O75677 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RFPL1O75677 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFPL1O75677 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFPL1O75677 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.99■□□□□ 0.79
RFPL1O75677 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
RFPL1O75677 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFPL1O75677 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFPL1O75677 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFPL1O75677 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RFPL1O75677 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
RFPL1O75677 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.99■□□□□ 0.79
RFPL1O75677 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms