Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF40AO75400 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRPF40AO75400 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.19■■□□□ 1.3
PRPF40AO75400 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 AL162430.1-201ENST00000480705 870 ntBASIC23.18■■□□□ 1.3
PRPF40AO75400 AC079140.4-201ENST00000507448 529 ntBASIC23.18■■□□□ 1.3
PRPF40AO75400 AC092666.2-201ENST00000613287 246 ntBASIC23.18■■□□□ 1.3
PRPF40AO75400 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPF40AO75400 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PRPF40AO75400 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRPF40AO75400 AC093503.3-201ENST00000624917 2352 ntBASIC23.18■■□□□ 1.3
PRPF40AO75400 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPF40AO75400 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.18■■□□□ 1.3
PRPF40AO75400 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRPF40AO75400 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF40AO75400 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 SLC7A5P2-201ENST00000553010 536 ntBASIC23.17■■□□□ 1.3
PRPF40AO75400 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.17■■□□□ 1.3
PRPF40AO75400 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF40AO75400 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.17■■□□□ 1.3
PRPF40AO75400 AC120498.10-201ENST00000621827 505 ntBASIC23.17■■□□□ 1.3
PRPF40AO75400 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PRPF40AO75400 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF40AO75400 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.17■■□□□ 1.3
PRPF40AO75400 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 Z82202.1-201ENST00000623446 1880 ntBASIC23.17■■□□□ 1.3
PRPF40AO75400 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 AC120498.9-201ENST00000339021 3867 ntBASIC23.17■■□□□ 1.3
PRPF40AO75400 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRPF40AO75400 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRPF40AO75400 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPF40AO75400 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PRPF40AO75400 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPF40AO75400 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PRPF40AO75400 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PRPF40AO75400 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PRPF40AO75400 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.16■■□□□ 1.3
PRPF40AO75400 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PRPF40AO75400 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPF40AO75400 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPF40AO75400 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PRPF40AO75400 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRPF40AO75400 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.16■■□□□ 1.3
PRPF40AO75400 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.16■■□□□ 1.3
PRPF40AO75400 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPF40AO75400 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.15■■□□□ 1.3
PRPF40AO75400 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRPF40AO75400 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.15■■□□□ 1.3
PRPF40AO75400 AC034268.1-201ENST00000441047 882 ntBASIC23.15■■□□□ 1.3
PRPF40AO75400 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPF40AO75400 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.15■■□□□ 1.3
PRPF40AO75400 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.15■■□□□ 1.3
PRPF40AO75400 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPF40AO75400 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.15■■□□□ 1.3
PRPF40AO75400 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
PRPF40AO75400 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.15■■□□□ 1.3
PRPF40AO75400 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRPF40AO75400 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms