Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.76■■□□□ 1.71
PTCD1O75127 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTCD1O75127 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.75■■□□□ 1.71
PTCD1O75127 CYP2D8P-201ENST00000433633 1490 ntBASIC25.75■■□□□ 1.71
PTCD1O75127 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.75■■□□□ 1.71
PTCD1O75127 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 KRT8P20-201ENST00000423953 1409 ntBASIC25.75■■□□□ 1.71
PTCD1O75127 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.75■■□□□ 1.71
PTCD1O75127 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.75■■□□□ 1.71
PTCD1O75127 CBFB-203ENST00000561924 584 ntTSL 5 BASIC25.75■■□□□ 1.71
PTCD1O75127 AC005363.2-201ENST00000618631 242 ntBASIC25.75■■□□□ 1.71
PTCD1O75127 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTCD1O75127 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.74■■□□□ 1.71
PTCD1O75127 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.74■■□□□ 1.71
PTCD1O75127 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PTCD1O75127 AC005521.1-201ENST00000393351 872 ntBASIC25.74■■□□□ 1.71
PTCD1O75127 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.74■■□□□ 1.71
PTCD1O75127 AC092865.7-201ENST00000641832 219 ntBASIC25.74■■□□□ 1.71
PTCD1O75127 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
PTCD1O75127 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PTCD1O75127 AF106564.1-201ENST00000607058 2553 ntBASIC25.74■■□□□ 1.71
PTCD1O75127 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTCD1O75127 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.73■■□□□ 1.71
PTCD1O75127 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PTCD1O75127 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCD1O75127 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCD1O75127 NIFKP9-201ENST00000419265 221 ntBASIC25.73■■□□□ 1.71
PTCD1O75127 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCD1O75127 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.73■■□□□ 1.71
PTCD1O75127 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PTCD1O75127 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
PTCD1O75127 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCD1O75127 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 ARMC10P1-201ENST00000313754 855 ntBASIC25.72■■□□□ 1.71
PTCD1O75127 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.72■■□□□ 1.71
PTCD1O75127 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.72■■□□□ 1.71
PTCD1O75127 KSR1P1-201ENST00000446298 240 ntBASIC25.72■■□□□ 1.71
PTCD1O75127 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.72■■□□□ 1.71
PTCD1O75127 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
PTCD1O75127 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.72■■□□□ 1.71
PTCD1O75127 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.72■■□□□ 1.71
PTCD1O75127 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.72■■□□□ 1.71
PTCD1O75127 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 FEM1AP4-201ENST00000443167 1987 ntBASIC25.72■■□□□ 1.71
PTCD1O75127 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
PTCD1O75127 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTCD1O75127 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
PTCD1O75127 LINC01568-207ENST00000641790 1380 ntBASIC25.71■■□□□ 1.71
PTCD1O75127 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.71■■□□□ 1.71
PTCD1O75127 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD1O75127 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.71■■□□□ 1.71
PTCD1O75127 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
PTCD1O75127 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.71■■□□□ 1.71
PTCD1O75127 AC116562.2-201ENST00000507042 360 ntBASIC25.71■■□□□ 1.71
PTCD1O75127 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.71■■□□□ 1.71
PTCD1O75127 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.71■■□□□ 1.71
PTCD1O75127 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
PTCD1O75127 AL049597.2-201ENST00000565575 961 ntBASIC25.71■■□□□ 1.71
PTCD1O75127 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.71■■□□□ 1.71
PTCD1O75127 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.71■■□□□ 1.71
PTCD1O75127 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD1O75127 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD1O75127 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.71■■□□□ 1.71
PTCD1O75127 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD1O75127 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PTCD1O75127 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.71■■□□□ 1.71
PTCD1O75127 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.71■■□□□ 1.71
PTCD1O75127 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PTCD1O75127 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PTCD1O75127 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.7■■□□□ 1.7
PTCD1O75127 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PTCD1O75127 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCD1O75127 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PTCD1O75127 KRT18P57-201ENST00000443599 1254 ntBASIC25.7■■□□□ 1.7
PTCD1O75127 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PTCD1O75127 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PTCD1O75127 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCD1O75127 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.7■■□□□ 1.7
PTCD1O75127 KRT8P17-201ENST00000453110 1448 ntBASIC25.7■■□□□ 1.7
PTCD1O75127 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.69■■□□□ 1.7
PTCD1O75127 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.69■■□□□ 1.7
PTCD1O75127 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTCD1O75127 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms