Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM13O60858 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM13O60858 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM13O60858 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM13O60858 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.64■□□□□ 0.74
TRIM13O60858 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM13O60858 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 KRT19P1-201ENST00000405746 1186 ntBASIC19.64■□□□□ 0.73
TRIM13O60858 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM13O60858 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM13O60858 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
TRIM13O60858 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM13O60858 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM13O60858 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM13O60858 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM13O60858 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM13O60858 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM13O60858 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM13O60858 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM13O60858 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM13O60858 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 AC009237.14-201ENST00000609975 1594 ntBASIC19.63■□□□□ 0.73
TRIM13O60858 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM13O60858 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM13O60858 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM13O60858 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM13O60858 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM13O60858 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM13O60858 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.62■□□□□ 0.73
TRIM13O60858 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM13O60858 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM13O60858 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 TNXA-203ENST00000507684 2038 ntBASIC19.62■□□□□ 0.73
TRIM13O60858 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM13O60858 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM13O60858 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM13O60858 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM13O60858 CYP21A1P-202ENST00000354927 1481 ntBASIC19.61■□□□□ 0.73
TRIM13O60858 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM13O60858 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM13O60858 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM13O60858 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM13O60858 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM13O60858 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 UBE2DNL-204ENST00000602536 740 ntBASIC19.61■□□□□ 0.73
TRIM13O60858 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms