Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZIC3O60481 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ZIC3O60481 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ZIC3O60481 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
ZIC3O60481 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.02■□□□□ 0.47
ZIC3O60481 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.02■□□□□ 0.47
ZIC3O60481 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZIC3O60481 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZIC3O60481 BX119927.1-201ENST00000636596 1552 ntBASIC18.01■□□□□ 0.47
ZIC3O60481 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ZIC3O60481 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.01■□□□□ 0.47
ZIC3O60481 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.01■□□□□ 0.47
ZIC3O60481 AL121829.2-201ENST00000620908 328 ntBASIC18.01■□□□□ 0.47
ZIC3O60481 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.01■□□□□ 0.47
ZIC3O60481 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ZIC3O60481 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZIC3O60481 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZIC3O60481 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 GCSHP5-201ENST00000443090 522 ntBASIC18■□□□□ 0.47
ZIC3O60481 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18■□□□□ 0.47
ZIC3O60481 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 AC142381.4-202ENST00000563973 229 ntBASIC18■□□□□ 0.47
ZIC3O60481 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18■□□□□ 0.47
ZIC3O60481 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18■□□□□ 0.47
ZIC3O60481 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZIC3O60481 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZIC3O60481 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18■□□□□ 0.47
ZIC3O60481 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZIC3O60481 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.99■□□□□ 0.47
ZIC3O60481 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.99■□□□□ 0.47
ZIC3O60481 RPPH1-201ENST00000516869 333 ntBASIC17.99■□□□□ 0.47
ZIC3O60481 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
ZIC3O60481 C1QBPP2-201ENST00000528754 825 ntBASIC17.99■□□□□ 0.47
ZIC3O60481 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.99■□□□□ 0.47
ZIC3O60481 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZIC3O60481 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.99■□□□□ 0.47
ZIC3O60481 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZIC3O60481 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.98■□□□□ 0.47
ZIC3O60481 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
ZIC3O60481 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.98■□□□□ 0.47
ZIC3O60481 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.98■□□□□ 0.47
ZIC3O60481 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.98■□□□□ 0.47
ZIC3O60481 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.98■□□□□ 0.47
ZIC3O60481 AL359736.2-201ENST00000621992 437 ntBASIC17.98■□□□□ 0.47
ZIC3O60481 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.98■□□□□ 0.47
ZIC3O60481 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.98■□□□□ 0.47
ZIC3O60481 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.98■□□□□ 0.47
ZIC3O60481 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.98■□□□□ 0.47
ZIC3O60481 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.98■□□□□ 0.47
ZIC3O60481 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZIC3O60481 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms