Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SLC28A2O43868 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC28A2O43868 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC28A2O43868 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 RCN1P1-201ENST00000400413 996 ntBASIC19.22■□□□□ 0.67
SLC28A2O43868 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC28A2O43868 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 RN7SL471P-201ENST00000580476 299 ntBASIC19.22■□□□□ 0.67
SLC28A2O43868 AC060766.5-201ENST00000590539 871 ntBASIC19.22■□□□□ 0.67
SLC28A2O43868 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC28A2O43868 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC28A2O43868 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC28A2O43868 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC28A2O43868 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC28A2O43868 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC28A2O43868 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SLC28A2O43868 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A2O43868 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC28A2O43868 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A2O43868 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A2O43868 AC245052.3-201ENST00000450182 901 ntBASIC19.21■□□□□ 0.67
SLC28A2O43868 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC28A2O43868 KRT18P35-201ENST00000510488 1269 ntBASIC19.21■□□□□ 0.67
SLC28A2O43868 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC28A2O43868 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC28A2O43868 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC28A2O43868 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC28A2O43868 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC28A2O43868 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC28A2O43868 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC28A2O43868 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC28A2O43868 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC28A2O43868 KRT16P2-201ENST00000414673 1423 ntBASIC19.2■□□□□ 0.66
SLC28A2O43868 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 TSPY7P-201ENST00000431358 1114 ntBASIC19.2■□□□□ 0.66
SLC28A2O43868 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SLC28A2O43868 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC28A2O43868 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC28A2O43868 AL591742.1-201ENST00000604433 565 ntBASIC19.2■□□□□ 0.66
SLC28A2O43868 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC28A2O43868 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC28A2O43868 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC28A2O43868 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC28A2O43868 AC020907.5-201ENST00000624372 1936 ntBASIC19.19■□□□□ 0.66
SLC28A2O43868 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC28A2O43868 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A2O43868 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC28A2O43868 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC28A2O43868 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms