Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBFD1O14562 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
UBFD1O14562 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.39■□□□□ 0.69
UBFD1O14562 MCRIP2P1-201ENST00000394346 511 ntBASIC19.39■□□□□ 0.69
UBFD1O14562 KRT18P11-201ENST00000435214 1283 ntBASIC19.39■□□□□ 0.69
UBFD1O14562 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.39■□□□□ 0.69
UBFD1O14562 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.39■□□□□ 0.69
UBFD1O14562 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBFD1O14562 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
UBFD1O14562 AC011767.1-201ENST00000617410 1153 ntBASIC19.39■□□□□ 0.69
UBFD1O14562 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
UBFD1O14562 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.39■□□□□ 0.69
UBFD1O14562 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UBFD1O14562 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBFD1O14562 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
UBFD1O14562 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UBFD1O14562 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.38■□□□□ 0.69
UBFD1O14562 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.38■□□□□ 0.69
UBFD1O14562 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.38■□□□□ 0.69
UBFD1O14562 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 AC100791.3-201ENST00000617619 330 ntBASIC19.38■□□□□ 0.69
UBFD1O14562 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBFD1O14562 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBFD1O14562 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBFD1O14562 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBFD1O14562 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.37■□□□□ 0.69
UBFD1O14562 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBFD1O14562 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
UBFD1O14562 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.37■□□□□ 0.69
UBFD1O14562 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.37■□□□□ 0.69
UBFD1O14562 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.37■□□□□ 0.69
UBFD1O14562 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBFD1O14562 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.37■□□□□ 0.69
UBFD1O14562 BX323043.1-201ENST00000641006 1765 ntBASIC19.37■□□□□ 0.69
UBFD1O14562 AP000974.1-201ENST00000623909 2387 ntBASIC19.36■□□□□ 0.69
UBFD1O14562 AL020996.1-203ENST00000536896 2307 ntBASIC19.36■□□□□ 0.69
UBFD1O14562 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBFD1O14562 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBFD1O14562 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.36■□□□□ 0.69
UBFD1O14562 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBFD1O14562 AC105020.6-201ENST00000621523 1217 ntBASIC19.36■□□□□ 0.69
UBFD1O14562 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.36■□□□□ 0.69
UBFD1O14562 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.36■□□□□ 0.69
UBFD1O14562 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
UBFD1O14562 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBFD1O14562 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UBFD1O14562 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.35■□□□□ 0.69
UBFD1O14562 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBFD1O14562 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms