Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.3■□□□□ 0.68
SDHDO14521 KRT18P61-201ENST00000585825 1298 ntBASIC19.3■□□□□ 0.68
SDHDO14521 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHDO14521 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SDHDO14521 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHDO14521 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SDHDO14521 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 UBE2DNL-204ENST00000602536 740 ntBASIC19.29■□□□□ 0.68
SDHDO14521 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.29■□□□□ 0.68
SDHDO14521 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SDHDO14521 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SDHDO14521 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SDHDO14521 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.28■□□□□ 0.68
SDHDO14521 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.28■□□□□ 0.68
SDHDO14521 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.28■□□□□ 0.68
SDHDO14521 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.28■□□□□ 0.68
SDHDO14521 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.28■□□□□ 0.68
SDHDO14521 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SDHDO14521 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SDHDO14521 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHDO14521 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHDO14521 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.27■□□□□ 0.68
SDHDO14521 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SDHDO14521 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHDO14521 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.27■□□□□ 0.68
SDHDO14521 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHDO14521 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.27■□□□□ 0.68
SDHDO14521 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.27■□□□□ 0.68
SDHDO14521 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SDHDO14521 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SDHDO14521 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHDO14521 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHDO14521 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.27■□□□□ 0.67
SDHDO14521 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.27■□□□□ 0.67
SDHDO14521 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.27■□□□□ 0.67
SDHDO14521 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SDHDO14521 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.26■□□□□ 0.67
SDHDO14521 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.26■□□□□ 0.67
SDHDO14521 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.26■□□□□ 0.67
SDHDO14521 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 MYCNOS-205ENST00000641950 531 ntBASIC19.26■□□□□ 0.67
SDHDO14521 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHDO14521 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.26■□□□□ 0.67
SDHDO14521 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms