Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTCAO00442 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.07■□□□□ 0.64
RTCAO00442 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 KRT8P17-201ENST00000453110 1448 ntBASIC19.07■□□□□ 0.64
RTCAO00442 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTCAO00442 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.06■□□□□ 0.64
RTCAO00442 AL355802.2-201ENST00000402069 882 ntBASIC19.06■□□□□ 0.64
RTCAO00442 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.06■□□□□ 0.64
RTCAO00442 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.06■□□□□ 0.64
RTCAO00442 AL031963.3-201ENST00000606441 850 ntBASIC19.06■□□□□ 0.64
RTCAO00442 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.06■□□□□ 0.64
RTCAO00442 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTCAO00442 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
RTCAO00442 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTCAO00442 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RTCAO00442 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.05■□□□□ 0.64
RTCAO00442 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RTCAO00442 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RTCAO00442 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.05■□□□□ 0.64
RTCAO00442 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.05■□□□□ 0.64
RTCAO00442 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.05■□□□□ 0.64
RTCAO00442 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RTCAO00442 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTCAO00442 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 ID1-201ENST00000376105 1233 ntBASIC19.04■□□□□ 0.64
RTCAO00442 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RTCAO00442 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RTCAO00442 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 KRT8P20-201ENST00000423953 1409 ntBASIC19.04■□□□□ 0.64
RTCAO00442 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.04■□□□□ 0.64
RTCAO00442 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RTCAO00442 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RTCAO00442 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTCAO00442 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.04■□□□□ 0.64
RTCAO00442 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.04■□□□□ 0.64
RTCAO00442 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.04■□□□□ 0.64
RTCAO00442 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RTCAO00442 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.03■□□□□ 0.64
RTCAO00442 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.03■□□□□ 0.64
RTCAO00442 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.03■□□□□ 0.64
RTCAO00442 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RTCAO00442 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.03■□□□□ 0.64
RTCAO00442 AC142086.2-201ENST00000569753 217 ntBASIC19.03■□□□□ 0.64
RTCAO00442 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.03■□□□□ 0.64
RTCAO00442 MYC-209ENST00000641252 345 ntBASIC19.03■□□□□ 0.64
RTCAO00442 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTCAO00442 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.02■□□□□ 0.64
RTCAO00442 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTCAO00442 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms