Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCA1A8K7I4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCA1A8K7I4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 AC093787.1-201ENST00000450396 207 ntBASIC18.63■□□□□ 0.57
CLCA1A8K7I4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 MKRN4P-201ENST00000444706 1521 ntBASIC18.63■□□□□ 0.57
CLCA1A8K7I4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCA1A8K7I4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 TMEM191A-211ENST00000637163 1067 ntBASIC18.62■□□□□ 0.57
CLCA1A8K7I4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCA1A8K7I4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 AC091799.1-201ENST00000422823 811 ntBASIC18.61■□□□□ 0.57
CLCA1A8K7I4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCA1A8K7I4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 AL512625.2-201ENST00000417533 625 ntBASIC18.6■□□□□ 0.57
CLCA1A8K7I4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 RARRES2P4-201ENST00000514074 484 ntBASIC18.6■□□□□ 0.57
CLCA1A8K7I4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 AC011484.1-201ENST00000377652 1995 ntBASIC18.6■□□□□ 0.57
CLCA1A8K7I4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCA1A8K7I4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA1A8K7I4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCA1A8K7I4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCA1A8K7I4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms