Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC091076.1-201ENST00000610741 619 ntBASIC19.62■□□□□ 0.73
C4orf47A7E2U8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.61■□□□□ 0.73
C4orf47A7E2U8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
C4orf47A7E2U8 AC007375.3-201ENST00000600936 2314 ntBASIC19.6■□□□□ 0.73
C4orf47A7E2U8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 NIFKP9-201ENST00000419265 221 ntBASIC19.6■□□□□ 0.73
C4orf47A7E2U8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C4orf47A7E2U8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.59■□□□□ 0.73
C4orf47A7E2U8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C4orf47A7E2U8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 AK4P3-201ENST00000418260 669 ntBASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 ECEL1P2-202ENST00000465689 757 ntBASIC19.58■□□□□ 0.72
C4orf47A7E2U8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 KRT18P56-201ENST00000507275 550 ntBASIC19.58■□□□□ 0.72
C4orf47A7E2U8 C2orf69P3-201ENST00000565542 1120 ntBASIC19.58■□□□□ 0.72
C4orf47A7E2U8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C4orf47A7E2U8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 AC027702.1-201ENST00000563810 1770 ntBASIC19.57■□□□□ 0.72
C4orf47A7E2U8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms