Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC011767.1-201ENST00000617410 1153 ntBASIC21.53■■□□□ 1.04
LRRC53A6NM62 AC100791.3-201ENST00000617619 330 ntBASIC21.53■■□□□ 1.04
LRRC53A6NM62 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 KRT8P17-201ENST00000453110 1448 ntBASIC21.53■■□□□ 1.04
LRRC53A6NM62 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.52■■□□□ 1.04
LRRC53A6NM62 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 AC105020.6-201ENST00000621523 1217 ntBASIC21.52■■□□□ 1.04
LRRC53A6NM62 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LRRC53A6NM62 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC53A6NM62 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRRC53A6NM62 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
LRRC53A6NM62 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 AC016769.1-201ENST00000409132 1010 ntBASIC21.51■■□□□ 1.03
LRRC53A6NM62 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 AC093484.2-201ENST00000580996 2166 ntBASIC21.51■■□□□ 1.03
LRRC53A6NM62 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRRC53A6NM62 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC53A6NM62 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LRRC53A6NM62 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRC53A6NM62 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC009237.14-201ENST00000609975 1594 ntBASIC21.49■■□□□ 1.03
LRRC53A6NM62 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC006015.1-201ENST00000429970 570 ntBASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 AC005332.7-201ENST00000614046 2005 ntBASIC21.49■■□□□ 1.03
LRRC53A6NM62 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRC53A6NM62 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC53A6NM62 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC53A6NM62 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms