Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 AC016405.3-201ENST00000607710 860 ntBASIC21.26■□□□□ 0.99
RCCD1A6NED2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 MYCNOS-205ENST00000641950 531 ntBASIC21.26■□□□□ 0.99
RCCD1A6NED2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RCCD1A6NED2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.26■□□□□ 0.99
RCCD1A6NED2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RCCD1A6NED2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.25■□□□□ 0.99
RCCD1A6NED2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 AC093503.3-201ENST00000624917 2352 ntBASIC21.24■□□□□ 0.99
RCCD1A6NED2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RCCD1A6NED2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.24■□□□□ 0.99
RCCD1A6NED2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.23■□□□□ 0.99
RCCD1A6NED2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RCCD1A6NED2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.23■□□□□ 0.99
RCCD1A6NED2 KRT19P1-201ENST00000405746 1186 ntBASIC21.23■□□□□ 0.99
RCCD1A6NED2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.23■□□□□ 0.99
RCCD1A6NED2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RCCD1A6NED2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RCCD1A6NED2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.22■□□□□ 0.99
RCCD1A6NED2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 AL032819.2-201ENST00000624543 2162 ntBASIC21.21■□□□□ 0.99
RCCD1A6NED2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms