Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC27.25■■□□□ 1.95
SBNO1A3KN83 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.25■■□□□ 1.95
SBNO1A3KN83 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SBNO1A3KN83 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC27.24■■□□□ 1.95
SBNO1A3KN83 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 HLA-G-202ENST00000376815 851 ntBASIC27.24■■□□□ 1.95
SBNO1A3KN83 HLA-G-203ENST00000376818 1127 ntBASIC27.24■■□□□ 1.95
SBNO1A3KN83 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC27.24■■□□□ 1.95
SBNO1A3KN83 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.24■■□□□ 1.95
SBNO1A3KN83 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SBNO1A3KN83 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC27.24■■□□□ 1.95
SBNO1A3KN83 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 AC022616.7-201ENST00000525383 220 ntBASIC27.23■■□□□ 1.95
SBNO1A3KN83 USF2-205ENST00000594064 1179 ntTSL 2 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 GRAMD4P8-201ENST00000605465 1115 ntBASIC27.23■■□□□ 1.95
SBNO1A3KN83 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
SBNO1A3KN83 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SBNO1A3KN83 LIN28AP1-201ENST00000429574 405 ntBASIC27.22■■□□□ 1.95
SBNO1A3KN83 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 B3GAT3P1-201ENST00000471720 806 ntBASIC27.22■■□□□ 1.95
SBNO1A3KN83 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 MYC-208ENST00000641036 567 ntBASIC27.22■■□□□ 1.95
SBNO1A3KN83 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SBNO1A3KN83 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SBNO1A3KN83 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SBNO1A3KN83 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SBNO1A3KN83 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SBNO1A3KN83 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.22■■□□□ 1.95
SBNO1A3KN83 ECEL1P2-202ENST00000465689 757 ntBASIC27.22■■□□□ 1.95
SBNO1A3KN83 FAM87A-204ENST00000613235 858 ntBASIC27.22■■□□□ 1.95
SBNO1A3KN83 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SBNO1A3KN83 AC063952.2-201ENST00000498792 1227 ntBASIC27.21■■□□□ 1.95
SBNO1A3KN83 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC27.21■■□□□ 1.95
SBNO1A3KN83 FBXW4P1-201ENST00000426721 2239 ntBASIC27.21■■□□□ 1.95
SBNO1A3KN83 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SBNO1A3KN83 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC27.2■■□□□ 1.95
SBNO1A3KN83 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.2■■□□□ 1.95
SBNO1A3KN83 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SBNO1A3KN83 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SBNO1A3KN83 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SBNO1A3KN83 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SBNO1A3KN83 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SBNO1A3KN83 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 ATP5G1P1-201ENST00000448724 379 ntBASIC27.2■■□□□ 1.94
SBNO1A3KN83 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SBNO1A3KN83 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SBNO1A3KN83 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC27.2■■□□□ 1.94
SBNO1A3KN83 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms