Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 AC073210.2-201ENST00000430369 194 ntBASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBV5S1A1TA0A578 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 AC142086.2-201ENST00000569753 217 ntBASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 TREX1-205ENST00000625293 1783 ntBASIC20.9■□□□□ 0.94
TCRBV5S1A1TA0A578 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBV5S1A1TA0A578 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TCRBV5S1A1TA0A578 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.89■□□□□ 0.94
TCRBV5S1A1TA0A578 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TCRBV5S1A1TA0A578 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AC005829.2-201ENST00000571422 1056 ntBASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 MIR4758-201ENST00000577688 71 ntBASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AC104771.1-201ENST00000603335 964 ntBASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AL109923.1-201ENST00000618799 583 ntBASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 AL158211.5-201ENST00000623583 2518 ntBASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV5S1A1TA0A578 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 AC083880.1-201ENST00000608266 535 ntBASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV5S1A1TA0A578 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 PHGDH-210ENST00000641115 1638 ntBASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TCRBV5S1A1TA0A578 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms