Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC010997.5-201ENST00000609182 354 ntBASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 AC009237.3-201ENST00000393279 1427 ntBASIC14.02□□□□□ -0.16
TRAV12-1A0A0B4J245 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 AC099791.2-201ENST00000605725 427 ntBASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 AC135050.7-201ENST00000624508 2218 ntBASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-1A0A0B4J245 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 NTF6A-201ENST00000591175 560 ntBASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 DPP3P2-201ENST00000416030 1696 ntBASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-1A0A0B4J245 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms