Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RN7SL237P-201ENST00000580912 287 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 DTNA-220ENST00000590831 847 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 RN7SL680P-201ENST00000620379 299 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC129908.1-201ENST00000624553 648 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AP000842.4-201ENST00000638781 748 ntBASIC5.34□□□□□ -1.55
AP1S3Q96PC3 SMG7-216ENST00000638826 219 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.34□□□□□ -1.55
AP1S3Q96PC3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP1S3Q96PC3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AP003486.1-201ENST00000525716 3994 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC010401.2-201ENST00000575137 4934 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RNU4-59P-201ENST00000364447 116 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PPIAP25-201ENST00000420177 540 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RPL3P8-201ENST00000432928 1191 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PGBD4P1-201ENST00000473644 407 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RN7SL505P-201ENST00000482644 293 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC068522.1-201ENST00000482895 345 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC026826.1-201ENST00000493002 361 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RN7SKP248-201ENST00000516278 305 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AP001767.2-201ENST00000527291 382 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC244131.1-201ENST00000542152 922 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 MIR3135A-201ENST00000578460 77 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AF146191.1-201ENST00000604941 889 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL590560.2-201ENST00000608430 732 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL031658.2-201ENST00000616850 651 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AC245028.3-201ENST00000618197 285 ntBASIC5.33□□□□□ -1.56
AP1S3Q96PC3 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms