Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AL590240.2-201ENST00000413370 894 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AL590128.1-201ENST00000433407 286 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 COL11A2P1-205ENST00000441798 676 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 RPL7L1P11-201ENST00000446092 721 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC009955.2-201ENST00000597288 542 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 AL355333.1-201ENST00000605632 279 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC026367.2-201ENST00000610630 553 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 AP005212.3-201ENST00000619964 528 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 RPL5P6-201ENST00000425640 886 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 RPS10P21-201ENST00000430654 475 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 GAPDHP59-201ENST00000435908 267 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 Z83838.1-202ENST00000456225 839 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 RN7SL379P-201ENST00000479912 293 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC091874.2-201ENST00000505889 720 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 RNA5SP318-201ENST00000516352 92 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC007537.1-201ENST00000539347 327 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 TDGP1-201ENST00000543961 1229 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC037479.1-201ENST00000558361 625 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC005726.4-201ENST00000582858 458 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 CR382285.1-202ENST00000604687 547 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 MIR6861-201ENST00000618657 64 ntBASIC8.5□□□□□ -1.05
SNED1Q8TER0 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.5□□□□□ -1.05
SNED1Q8TER0 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNED1Q8TER0 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC009163.7-201ENST00000621929 2557 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 RN7SKP129-201ENST00000410288 299 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC092106.2-201ENST00000436597 487 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 RPS26P11-201ENST00000463445 348 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 RPS26P6-201ENST00000475156 348 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC093664.1-201ENST00000511779 289 ntBASIC8.49□□□□□ -1.05
SNED1Q8TER0 AC022296.2-201ENST00000512424 202 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms