Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AL035563.1-201ENST00000609087 1539 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC034111.1-201ENST00000562143 3770 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SAMMSON-203ENST00000641005 2168 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 Z93929.1-201ENST00000418200 1475 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 IFNA12P-201ENST00000413147 571 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC231533.2-201ENST00000419045 978 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 FTOP1-201ENST00000419363 861 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL390840.1-201ENST00000420303 988 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL121916.1-201ENST00000429405 308 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC073900.1-201ENST00000429766 776 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC007790.1-201ENST00000439081 782 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PRELID1P3-201ENST00000450055 643 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL591379.2-201ENST00000450223 397 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PSPC1P2-201ENST00000455130 225 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC013429.1-201ENST00000456604 422 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 RN7SL58P-201ENST00000473445 294 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 RPL7AP56-201ENST00000476420 791 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 RPL5P3-201ENST00000493817 889 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 Z99943.2-201ENST00000507585 266 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC006070.1-201ENST00000508151 193 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC090539.2-201ENST00000523425 671 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 RPS7P1-201ENST00000571702 585 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL390058.1-201ENST00000603834 629 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 FAM27E3-202ENST00000614611 340 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CASC19-232ENST00000641480 1244 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 DDX10P2-201ENST00000417796 2614 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC022819.1-201ENST00000563495 3910 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 MAPK10-323ENST00000641493 3207 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC122713.2-201ENST00000624942 3335 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 NR1H5P-201ENST00000452683 1377 ntBASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC4.77□□□□□ -1.65
SYCNQ0VAF6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 LARS-212ENST00000510191 3737 ntTSL 2 BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 RAD17P2-201ENST00000451754 1977 ntBASIC4.76□□□□□ -1.65
SYCNQ0VAF6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYCNQ0VAF6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms