Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HOXD10P28358 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 RNA5SP472-201ENST00000363868 119 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 RN7SKP15-201ENST00000364742 309 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 RN7SKP130-201ENST00000364924 301 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 VN1R3-201ENST00000418822 919 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC242426.1-201ENST00000435270 960 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 RPS26P11-201ENST00000463445 348 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 AC040975.1-201ENST00000472104 316 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 RPS26P6-201ENST00000475156 348 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.17□□□□□ -1.1
HOXD10P28358 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 AC134669.1-201ENST00000581275 672 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 AC011447.2-201ENST00000592921 283 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 RN7SL126P-201ENST00000616400 299 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 MIR1910-201ENST00000636955 80 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 CASC19-232ENST00000641480 1244 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 CASC19-274ENST00000642018 970 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXD10P28358 ASNSP6-201ENST00000592770 1618 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 OR52B5P-204ENST00000641744 3467 ntBASIC8.17□□□□□ -1.1
HOXD10P28358 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXD10P28358 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXD10P28358 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.16□□□□□ -1.1
HOXD10P28358 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HOXD10P28358 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
HOXD10P28358 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 SNORA64.3-201ENST00000365647 134 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD10P28358 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HOXD10P28358 SNORA7A-201ENST00000384765 139 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AC019178.1-201ENST00000392337 440 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AL356361.1-201ENST00000400943 1459 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 RN7SKP86-201ENST00000410454 332 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 CDC42P6-201ENST00000421246 576 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AC007365.2-201ENST00000428806 458 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AC128677.1-201ENST00000436016 442 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD10P28358 CCNJP2-201ENST00000457810 1163 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
HOXD10P28358 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.16□□□□□ -1.1
HOXD10P28358 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.16□□□□□ -1.1
HOXD10P28358 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.16□□□□□ -1.1
HOXD10P28358 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HOXD10P28358 TRIM53BP-201ENST00000532912 1720 ntBASIC8.16□□□□□ -1.1
HOXD10P28358 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms