Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FREM3P0C091 RPSAP48-201ENST00000466509 889 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 PGAM4P2-201ENST00000512491 721 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 AC007068.2-201ENST00000543168 395 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.46□□□□□ -1.38
FREM3P0C091 AC009955.2-201ENST00000597288 542 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 AC097381.3-201ENST00000608962 462 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.46□□□□□ -1.38
FREM3P0C091 CASC19-232ENST00000641480 1244 ntBASIC6.46□□□□□ -1.38
FREM3P0C091 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FREM3P0C091 KYNUP2-201ENST00000582280 1329 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
FREM3P0C091 AL390840.1-201ENST00000420303 988 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 PUDPP2-201ENST00000431423 643 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 OSTCP2-201ENST00000437956 444 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC079193.1-201ENST00000460497 588 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC120036.3-201ENST00000517826 292 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
FREM3P0C091 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 MRPL57P3-201ENST00000619218 176 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 AC073488.7-201ENST00000633785 778 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 AP003119.3-201ENST00000566747 4192 ntBASIC6.45□□□□□ -1.38
FREM3P0C091 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
FREM3P0C091 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.45□□□□□ -1.38
FREM3P0C091 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.45□□□□□ -1.38
FREM3P0C091 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
FREM3P0C091 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 RN7SKP107-201ENST00000364157 290 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 SUMO2P13-201ENST00000403109 272 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 MIR1204-201ENST00000408388 67 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 HMGN1P6-201ENST00000438508 291 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.44□□□□□ -1.38
FREM3P0C091 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC131233.1-201ENST00000479200 955 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AF305872.1-201ENST00000485217 471 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.44□□□□□ -1.38
FREM3P0C091 IGLVI-42-201ENST00000522485 381 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 AP001803.1-201ENST00000525668 147 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC091932.1-201ENST00000569381 427 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 EIF4A3P1-201ENST00000578499 647 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC092032.1-201ENST00000603090 165 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AP005329.3-201ENST00000609924 686 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
FREM3P0C091 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 MIR27A-201ENST00000385073 78 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 CYCSP44-201ENST00000448560 313 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AC146944.3-201ENST00000509969 371 ntBASIC6.44□□□□□ -1.38
FREM3P0C091 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.44□□□□□ -1.38
FREM3P0C091 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.44□□□□□ -1.38
FREM3P0C091 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.44□□□□□ -1.38
FREM3P0C091 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
FREM3P0C091 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FREM3P0C091 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms