Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.58□□□□□ -1.04
CHGBP05060 NDUFA3P2-201ENST00000531434 232 ntBASIC8.58□□□□□ -1.04
CHGBP05060 AC090241.1-201ENST00000587732 621 ntBASIC8.58□□□□□ -1.04
CHGBP05060 AC010463.3-201ENST00000594077 500 ntBASIC8.58□□□□□ -1.04
CHGBP05060 AL355333.1-201ENST00000605632 279 ntBASIC8.58□□□□□ -1.04
CHGBP05060 AC139792.1-201ENST00000607051 647 ntBASIC8.58□□□□□ -1.04
CHGBP05060 AC087894.3-201ENST00000623682 349 ntBASIC8.58□□□□□ -1.04
CHGBP05060 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHGBP05060 AC093844.1-201ENST00000514910 1361 ntBASIC8.58□□□□□ -1.04
CHGBP05060 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHGBP05060 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHGBP05060 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CHGBP05060 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHGBP05060 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHGBP05060 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.57□□□□□ -1.04
CHGBP05060 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHGBP05060 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 AC006511.2-201ENST00000388966 660 ntBASIC8.57□□□□□ -1.04
CHGBP05060 RN7SKP254-201ENST00000410685 310 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC8.57□□□□□ -1.04
CHGBP05060 AGKP1-201ENST00000455254 1263 ntBASIC8.57□□□□□ -1.04
CHGBP05060 RPL23AP68-201ENST00000480924 445 ntBASIC8.57□□□□□ -1.04
CHGBP05060 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 RNA5SP518-201ENST00000515957 119 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.57□□□□□ -1.04
CHGBP05060 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 AC084033.1-201ENST00000550830 633 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AL109628.1-201ENST00000556877 366 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.57□□□□□ -1.04
CHGBP05060 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 AL512430.4-201ENST00000603085 613 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AL121782.1-201ENST00000611242 413 ntBASIC8.57□□□□□ -1.04
CHGBP05060 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.57□□□□□ -1.04
CHGBP05060 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 CDY7P-201ENST00000429883 1604 ntBASIC8.57□□□□□ -1.04
CHGBP05060 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 HCG18-244ENST00000602516 2890 ntBASIC8.57□□□□□ -1.04
CHGBP05060 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.57□□□□□ -1.04
CHGBP05060 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CHGBP05060 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHGBP05060 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.56□□□□□ -1.04
CHGBP05060 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CHGBP05060 AL139100.1-201ENST00000408001 498 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 FAM204CP-201ENST00000424489 642 ntBASIC8.56□□□□□ -1.04
CHGBP05060 CHCHD3P1-201ENST00000425516 676 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.56□□□□□ -1.04
CHGBP05060 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.56□□□□□ -1.04
CHGBP05060 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 MYL6P4-201ENST00000477911 453 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AC073648.3-201ENST00000504939 925 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AC017007.1-201ENST00000511960 415 ntBASIC8.56□□□□□ -1.04
CHGBP05060 RNA5SP75-201ENST00000516841 111 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AP002981.1-201ENST00000517692 975 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC8.56□□□□□ -1.04
CHGBP05060 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.56□□□□□ -1.04
CHGBP05060 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.56□□□□□ -1.04
CHGBP05060 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 MIR4428-201ENST00000584884 73 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AC024933.1-201ENST00000608472 348 ntBASIC8.56□□□□□ -1.04
CHGBP05060 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AL161420.1-201ENST00000619393 264 ntBASIC8.56□□□□□ -1.04
CHGBP05060 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.56□□□□□ -1.04
CHGBP05060 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CHGBP05060 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.56□□□□□ -1.04
CHGBP05060 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CHGBP05060 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHGBP05060 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms