Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
POLR2AP24928 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
POLR2AP24928 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
POLR2AP24928 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
POLR2AP24928 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
POLR2AP24928 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.21□□□□□ -1.1
POLR2AP24928 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 MAPK10-357ENST00000641831 2858 ntBASIC8.21□□□□□ -1.1
POLR2AP24928 PPIAP20-201ENST00000449839 135 ntBASIC8.21□□□□□ -1.1
POLR2AP24928 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.21□□□□□ -1.1
POLR2AP24928 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
POLR2AP24928 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.21□□□□□ -1.1
POLR2AP24928 AC012146.2-201ENST00000576545 416 ntBASIC8.21□□□□□ -1.1
POLR2AP24928 AC022400.9-201ENST00000623633 273 ntBASIC8.21□□□□□ -1.1
POLR2AP24928 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.2□□□□□ -1.1
POLR2AP24928 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.2□□□□□ -1.1
POLR2AP24928 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
POLR2AP24928 AC020978.6-201ENST00000571197 3177 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.2□□□□□ -1.1
POLR2AP24928 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
POLR2AP24928 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
POLR2AP24928 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 MIR188-201ENST00000385034 86 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 AL355994.1-201ENST00000424379 260 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC8.2□□□□□ -1.1
POLR2AP24928 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 AL445383.1-201ENST00000554689 874 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 AC017037.4-201ENST00000624526 826 ntBASIC8.2□□□□□ -1.1
POLR2AP24928 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.2□□□□□ -1.1
POLR2AP24928 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
POLR2AP24928 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
POLR2AP24928 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC8.19□□□□□ -1.1
POLR2AP24928 RN7SKP275-201ENST00000364626 301 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.19□□□□□ -1.1
POLR2AP24928 VN1R53P-201ENST00000429536 957 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 GAPDHP16-201ENST00000448152 962 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 NUCKS1P1-201ENST00000452067 703 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC8.19□□□□□ -1.1
POLR2AP24928 BX323845.2-201ENST00000458382 234 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC066616.1-201ENST00000486795 413 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC093870.1-201ENST00000506837 213 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC091849.1-201ENST00000509920 121 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 RNA5SP278-201ENST00000517055 102 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
POLR2AP24928 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
POLR2AP24928 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
POLR2AP24928 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 AC003045.1-201ENST00000398779 713 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 SNORA81.1-201ENST00000458922 177 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.19□□□□□ -1.1
POLR2AP24928 SNX18P23-201ENST00000510867 677 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.19□□□□□ -1.1
POLR2AP24928 AC120036.3-201ENST00000517826 292 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 TRIM77BP-201ENST00000524985 1119 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC135983.3-201ENST00000528049 1226 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.19□□□□□ -1.1
POLR2AP24928 NANOGNBP2-201ENST00000544753 553 ntBASIC8.19□□□□□ -1.1
POLR2AP24928 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms