Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 ASNSP6-201ENST00000592770 1618 ntBASIC7.55□□□□□ -1.2
FAM228BP0C875 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
FAM228BP0C875 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.55□□□□□ -1.2
FAM228BP0C875 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
FAM228BP0C875 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
FAM228BP0C875 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.55□□□□□ -1.2
FAM228BP0C875 AC110597.1-201ENST00000562669 3176 ntBASIC7.55□□□□□ -1.2
FAM228BP0C875 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
FAM228BP0C875 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 RNU6-1017P-201ENST00000363613 106 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 RNA5SP172-201ENST00000365061 118 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 RN7SKP254-201ENST00000410685 310 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.54□□□□□ -1.2
FAM228BP0C875 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 DUTP4-201ENST00000424782 475 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 GTF2F2P2-201ENST00000445825 721 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 RPS12P20-201ENST00000464109 380 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 RN7SL392P-201ENST00000473024 299 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 RN7SL705P-201ENST00000481678 294 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 RN7SL306P-201ENST00000492941 296 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 AC026826.1-201ENST00000493002 361 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 CHCHD2P7-201ENST00000508008 452 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 AC008417.1-201ENST00000510014 565 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 AC018523.1-201ENST00000534211 512 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 UBE2CP4-201ENST00000561405 535 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.54□□□□□ -1.2
FAM228BP0C875 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 FAM27E3-202ENST00000614611 340 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.54□□□□□ -1.2
FAM228BP0C875 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.54□□□□□ -1.2
FAM228BP0C875 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
FAM228BP0C875 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
FAM228BP0C875 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.54□□□□□ -1.2
FAM228BP0C875 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
FAM228BP0C875 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
FAM228BP0C875 AL391262.1-201ENST00000556558 1992 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.53□□□□□ -1.2
FAM228BP0C875 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.53□□□□□ -1.2
FAM228BP0C875 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 RNU1-24P-201ENST00000364285 165 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 CDK7P1-201ENST00000434574 693 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
FAM228BP0C875 RPL21P33-201ENST00000444831 484 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 TAAR3P-201ENST00000466706 1078 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 TAAR3P-202ENST00000481759 1025 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.53□□□□□ -1.2
FAM228BP0C875 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.53□□□□□ -1.2
FAM228BP0C875 OR5BK1P-201ENST00000550421 823 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.53□□□□□ -1.2
FAM228BP0C875 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.53□□□□□ -1.2
FAM228BP0C875 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 AC008385.1-201ENST00000604421 355 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 RN7SL778P-201ENST00000607160 297 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 AC087072.2-201ENST00000621060 682 ntBASIC7.53□□□□□ -1.2
FAM228BP0C875 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.53□□□□□ -1.2
FAM228BP0C875 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.53□□□□□ -1.2
FAM228BP0C875 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
FAM228BP0C875 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
FAM228BP0C875 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.52□□□□□ -1.2
FAM228BP0C875 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms