Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 AC026356.1-201ENST00000622688 1357 ntBASIC10.86□□□□□ -0.67
RIMBP3Q9UFD9 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 AL359922.2-201ENST00000581788 3017 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 AC005538.2-201ENST00000623215 1864 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 OR13C1P-202ENST00000641378 2919 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 RN7SKP232-201ENST00000410170 290 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 RPA2P2-201ENST00000419698 796 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 H3F3AP3-201ENST00000497682 407 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 AP000435.1-201ENST00000528539 496 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 MRPS21P8-201ENST00000569196 235 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC10.85□□□□□ -0.67
RIMBP3Q9UFD9 PCDHA4-204ENST00000618834 10557 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 OR3A2-201ENST00000408891 1076 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AP005202.1-201ENST00000489915 867 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 Y_RNA.667-201ENST00000516212 107 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 MAPK10-383ENST00000642032 3390 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AC090132.1-201ENST00000524071 1480 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL359694.1-201ENST00000403247 604 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 VN1R66P-201ENST00000412929 916 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 RANP6-201ENST00000413691 644 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 OR2L9P-201ENST00000444456 913 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 TVP23CP1-201ENST00000450317 639 ntBASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC10.84□□□□□ -0.67
RIMBP3Q9UFD9 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC10.83□□□□□ -0.67
RIMBP3Q9UFD9 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 MAPK10-379ENST00000642013 1385 ntBASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RIMBP3Q9UFD9 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms