Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 AP002800.1-201ENST00000624982 2225 ntBASIC7.57□□□□□ -1.2
LMO3Q8TAP4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 AC133552.3-201ENST00000572236 1869 ntBASIC7.57□□□□□ -1.2
LMO3Q8TAP4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 AP002364.1-201ENST00000623330 3386 ntBASIC7.57□□□□□ -1.2
LMO3Q8TAP4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 AC090774.4-201ENST00000578888 1372 ntBASIC7.57□□□□□ -1.2
LMO3Q8TAP4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LMO3Q8TAP4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AC007993.1-201ENST00000621298 2430 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 U3.14-201ENST00000365363 227 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 VDAC1P10-201ENST00000416715 891 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 CEACAMP5-201ENST00000448037 961 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 GAPDHP16-201ENST00000448152 962 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 PGBD4P1-201ENST00000473644 407 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 ENPP7P3-201ENST00000509123 241 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 EEF1B2P2-201ENST00000519625 676 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 NDUFA3P2-201ENST00000531434 232 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 OR7E161P-201ENST00000533722 967 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AC016144.1-201ENST00000548175 1087 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AP006587.6-201ENST00000582128 1091 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 RN7SL697P-201ENST00000582484 299 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AL035417.2-201ENST00000603887 796 ntBASIC7.56□□□□□ -1.2
LMO3Q8TAP4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LMO3Q8TAP4 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 SOD1P1-201ENST00000407803 440 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 RN7SKP271-201ENST00000410528 320 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 MTND6P1-201ENST00000417434 424 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 RBMY3AP-201ENST00000449381 1145 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 RPL34P34-201ENST00000465389 354 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 ADAM3B-201ENST00000569937 840 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC024614.1-201ENST00000577546 307 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC111186.1-201ENST00000604684 130 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC122710.3-201ENST00000606566 541 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AC091544.5-201ENST00000620192 3815 ntBASIC7.55□□□□□ -1.2
LMO3Q8TAP4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LMO3Q8TAP4 AL008638.3-201ENST00000623027 5182 ntBASIC7.54□□□□□ -1.2
LMO3Q8TAP4 AC129502.1-201ENST00000623261 1654 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms